U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC109083114 protein Wnt-7a [ Cyprinus carpio (common carp) ]

    Gene ID: 109083114, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC109083114
    Gene description
    protein Wnt-7a
    See related
    Ensembl:ENSCCRG00000047812
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinus carpio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC109083114 in Genome Data Viewer
    Location:
    chromosome: A11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    101 current ASM1834038v1 (GCF_018340385.1) A11 NC_056582.1 (15404235..15415545, complement)
    100 previous assembly common carp genome (GCF_000951615.1) Unplaced Scaffold NW_017543042.1 (705898..715553)

    Chromosome A11 - NC_056582.1Genomic Context describing neighboring genes Neighboring gene fibulin-2-like Neighboring gene uncharacterized LOC122146720 Neighboring gene uncharacterized LOC109083119 Neighboring gene protein tyrosine phosphatase domain-containing protein 1-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cytokine activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables frizzled binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell fate commitment IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in multicellular organism development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuron differentiation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in positive regulation of JNK cascade IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein Wnt-7a

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834038v1 Primary Assembly

    Genomic

    1. NC_056582.1 Reference ASM1834038v1 Primary Assembly

      Range
      15404235..15415545 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042766479.1 → XP_042622413.1  protein Wnt-7a

      UniProtKB/TrEMBL
      A0A8C1FBF7, A0A8C2ILB3
      Conserved Domains (1) summary
      cl38924
      Location:32 → 349
      Wnt; Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family

    2. XM_019097939.2 → XP_018953484.1  protein Wnt-7a

      UniProtKB/TrEMBL
      A0A8C1FBF7, A0A8C2ILB3
      Related
      ENSCCRP00000087893.1
      Conserved Domains (1) summary
      cl38924
      Location:32 → 349
      Wnt; Wnt domain found in the WNT signaling gene family, also called Wingless-type mouse mammary tumor virus (MMTV) integration site family
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases