U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC109102421 serine/threonine-protein kinase N1-like [ Cyprinus carpio (common carp) ]

    Gene ID: 109102421, updated on 7-Dec-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC109102421
    Gene description
    serine/threonine-protein kinase N1-like
    See related
    Ensembl:ENSCCRG00000021721
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cyprinus carpio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Cyprininae; Cyprinus
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC109102421 in Genome Data Viewer
    Location:
    chromosome: A3
    Exon count:
    22
    Annotation release Status Assembly Chr Location
    101 current ASM1834038v1 (GCF_018340385.1) A3 NC_056574.1 (5503937..5533024, complement)
    100 previous assembly common carp genome (GCF_000951615.1) 28 NC_031724.1 (14171956..14184022)

    Chromosome A3 - NC_056574.1Genomic Context describing neighboring genes Neighboring gene volume-regulated anion channel subunit LRRC8D-like Neighboring gene zinc finger protein Gfi-1b-like Neighboring gene uncharacterized LOC122139056 Neighboring gene mucin-5AC-like Neighboring gene envoplakin

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    LOW QUALITY PROTEIN: serine/threonine-protein kinase N1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Cyprinus carpio Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1834038v1 Primary Assembly

    Genomic

    1. NC_056574.1 Reference ASM1834038v1 Primary Assembly

      Range
      5503937..5533024 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042734735.1 → XP_042590669.1  LOW QUALITY PROTEIN: serine/threonine-protein kinase N1-like

      UniProtKB/TrEMBL
      A0A8C1WP67, A0A9J7ZRH8, A0A9Q9WW50
      Conserved Domains (5) summary
      cd11622
      Location:79 → 144
      HR1_PKN_1; First Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N
      cd11630
      Location:163 → 240
      HR1_PKN1_2; Second Protein kinase C-related kinase homology region 1 (HR1) Rho-binding domain of Protein Kinase N1
      cd05589
      Location:649 → 974
      STKc_PKN; Catalytic domain of the Serine/Threonine Kinase, Protein Kinase N
      cl00087
      Location:244 → 317
      HR1; Protein kinase C-related kinase homology region 1 (HR1) domain that binds Rho family small GTPases
      cl14603
      Location:425 → 512
      C2; C2 domain
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases