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    CERT1 ceramide transporter 1 [ Panthera tigris (tiger) ]

    Gene ID: 102965677, updated on 15-Nov-2024

    Summary

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    Gene symbol
    CERT1
    Gene description
    ceramide transporter 1
    See related
    Ensembl:ENSPTIG00000016589
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
    Also known as
    COL4A3BP
    Orthologs
    human mouse all
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    Genomic context

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    See CERT1 in Genome Data Viewer
    Location:
    chromosome: A1
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) A1 NC_056660.1 (139017038..139119571, complement)
    101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006711819.1 (14206893..14305692)

    Chromosome A1 - NC_056660.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 31 Neighboring gene 3-hydroxy-3-methylglutaryl-CoA reductase Neighboring gene U2 spliceosomal RNA Neighboring gene DNA polymerase kappa Neighboring gene ankyrin repeat and death domain containing 1B Neighboring gene eukaryotic translation initiation factor 3 subunit F-like Neighboring gene POC5 centriolar protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol-4-phosphate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in ER to Golgi ceramide transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ceramide transfer protein
    Names
    collagen type IV alpha 3 binding protein
    collagen, type IV, alpha 3 (Goodpasture antigen) binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Genomic

    1. NC_056660.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

      Range
      139017038..139119571 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042988546.1 → XP_042844480.1  ceramide transfer protein isoform X1

      Conserved Domains (2) summary
      cd08872
      Location:522 → 755
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:157 → 256
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    2. XM_042988553.1 → XP_042844487.1  ceramide transfer protein isoform X2

      Conserved Domains (2) summary
      cd08872
      Location:495 → 729
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:157 → 256
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    3. XM_015536539.2 → XP_015392025.1  ceramide transfer protein isoform X4

      UniProtKB/TrEMBL
      A0A8C9K582
      Conserved Domains (2) summary
      cd08872
      Location:384 → 617
      START_STARD11-like; Ceramide-binding START domain of mammalian STARD11 and related domains
      cd13283
      Location:26 → 118
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain

    4. XM_042988560.1 → XP_042844494.1  ceramide transfer protein isoform X3

      Conserved Domains (2) summary
      cd13283
      Location:157 → 256
      PH_GPBP; Goodpasture antigen binding protein Pleckstrin homology (PH) domain
      cl14643
      Location:522 → 603
      SRPBCC; START/RHO_alpha_C/PITP/Bet_v1/CoxG/CalC (SRPBCC) ligand-binding domain superfamily
    Nucleotide Protein
    Heading Accession and Version

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