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    FOXP4 forkhead box P4 [ Panthera tigris (tiger) ]

    Gene ID: 102962445, updated on 15-Nov-2024

    Summary

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    Gene symbol
    FOXP4
    Gene description
    forkhead box P4
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Panthera tigris
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Pantherinae; Panthera
    Orthologs
    human mouse all
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    Genomic context

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    See FOXP4 in Genome Data Viewer
    Location:
    chromosome: B2
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    102 current P.tigris_Pti1_mat1.1 (GCF_018350195.1) B2 NC_056664.1 (39623038..39674172)
    101 previous assembly PanTig1.0 (GCF_000464555.1) Unplaced Scaffold NW_006711908.1 (6537680..6556362, complement)

    Chromosome B2 - NC_056664.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102950096 Neighboring gene uncharacterized LOC107179934 Neighboring gene uncharacterized LOC122238629 Neighboring gene MyoD family inhibitor Neighboring gene transcription factor EB

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein P4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Panthera tigris Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference P.tigris_Pti1_mat1.1 Primary Assembly

    Genomic

    1. NC_056664.1 Reference P.tigris_Pti1_mat1.1 Primary Assembly

      Range
      39623038..39674172
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_042986321.1 → XP_042842255.1  forkhead box protein P4 isoform X1

      Conserved Domains (2) summary
      smart00339
      Location:469 → 558
      FH; FORKHEAD
      COG5025
      Location:366 → 579
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    2. XM_042986325.1 → XP_042842259.1  forkhead box protein P4 isoform X5

      Conserved Domains (2) summary
      smart00339
      Location:469 → 541
      FH; FORKHEAD
      COG5025
      Location:366 → 562
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    3. XM_042986324.1 → XP_042842258.1  forkhead box protein P4 isoform X4

      Conserved Domains (2) summary
      smart00339
      Location:457 → 546
      FH; FORKHEAD
      COG5025
      Location:418 → 608
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    4. XM_042986326.1 → XP_042842260.1  forkhead box protein P4 isoform X6

      Conserved Domains (2) summary
      smart00339
      Location:457 → 529
      FH; FORKHEAD
      COG5025
      Location:418 → 591
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    5. XM_042986322.1 → XP_042842256.1  forkhead box protein P4 isoform X2

      Conserved Domains (2) summary
      smart00339
      Location:468 → 557
      FH; FORKHEAD
      COG5025
      Location:365 → 578
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    6. XM_042986327.1 → XP_042842261.1  forkhead box protein P4 isoform X7

      Conserved Domains (2) summary
      smart00339
      Location:456 → 528
      FH; FORKHEAD
      COG5025
      Location:417 → 590
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    7. XM_042986323.1 → XP_042842257.1  forkhead box protein P4 isoform X3

      Conserved Domains (2) summary
      smart00339
      Location:458 → 547
      FH; FORKHEAD
      COG5025
      Location:355 → 568
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]

    8. XM_042986328.1 → XP_042842262.1  forkhead box protein P4 isoform X8

      Conserved Domains (2) summary
      smart00339
      Location:350 → 439
      FH; FORKHEAD
      COG5025
      Location:247 → 460
      COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    Nucleotide Protein
    Heading Accession and Version

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