U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    PKD serine/threonine-protein kinase D3 [ Penaeus japonicus ]

    Gene ID: 122249579, updated on 6-Jul-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    PKD
    Gene description
    serine/threonine-protein kinase D3
    See related
    EnsemblRapid:LOC122249579
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Penaeus japonicus
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Crustacea; Multicrustacea; Malacostraca; Eumalacostraca; Eucarida; Decapoda; Dendrobranchiata; Penaeoidea; Penaeidae; Penaeus
    Orthologs
    fruit fly all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See PKD in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current Mj_TUMSAT_v1.0 (GCF_017312705.1) Unplaced Scaffold NW_025030125.1 (212247..302823)

    NW_025030125.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC122249572 Neighboring gene Ras GTPase activating protein 1 Neighboring gene Serine/threonine-protein kinase tefu Neighboring gene glycine-rich protein 5-like

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NW_025030125 Unplaced Scaffold Reference Mj_TUMSAT_v1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    serine/threonine-protein kinase D3-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Penaeus japonicus Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Mj_TUMSAT_v1.0 Primary Assembly

    Genomic

    1. NW_025030125.1 Reference Mj_TUMSAT_v1.0 Primary Assembly

      Range
      212247..302823
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043010562.1 → XP_042866496.1  serine/threonine-protein kinase D3-like isoform X1

      Related
      XP_042866496.1, XM_043010562.1
      Conserved Domains (3) summary
      smart00109
      Location:241 → 290
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:359 → 486
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:514 → 773
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    2. XM_043010561.1 → XP_042866495.1  serine/threonine-protein kinase D3-like isoform X1

      Related
      XP_042866495.1, XM_043010561.1
      Conserved Domains (3) summary
      smart00109
      Location:241 → 290
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:359 → 486
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:514 → 773
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    3. XM_043010564.1 → XP_042866498.1  serine/threonine-protein kinase D3-like isoform X2

      Related
      XP_042866498.1, XM_043010564.1
      Conserved Domains (3) summary
      smart00109
      Location:235 → 284
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:353 → 480
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:508 → 767
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    4. XM_043010566.1 → XP_042866500.1  serine/threonine-protein kinase D3-like isoform X4

      Related
      XP_042866500.1, XM_043010566.1
      Conserved Domains (3) summary
      smart00109
      Location:200 → 249
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:318 → 445
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:473 → 732
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    5. XM_043010565.1 → XP_042866499.1  serine/threonine-protein kinase D3-like isoform X3

      Related
      XP_042866499.1, XM_043010565.1
      Conserved Domains (3) summary
      smart00109
      Location:226 → 275
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:344 → 471
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:499 → 758
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    6. XM_043010567.1 → XP_042866501.1  serine/threonine-protein kinase D3-like isoform X5

      Related
      XP_042866501.1, XM_043010567.1
      Conserved Domains (3) summary
      smart00109
      Location:191 → 240
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:309 → 436
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:464 → 723
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D

    7. XM_043010563.1 → XP_042866497.1  serine/threonine-protein kinase D3-like isoform X1

      Related
      XP_042866497.1, XM_043010563.1
      Conserved Domains (3) summary
      smart00109
      Location:241 → 290
      C1; Protein kinase C conserved region 1 (C1) domains (Cysteine-rich domains)
      cd01239
      Location:359 → 486
      PH_PKD; Protein kinase D (PKD/PKCmu) pleckstrin homology (PH) domain
      cd14082
      Location:514 → 773
      STKc_PKD; Catalytic domain of the Serine/Threonine kinase, Protein Kinase D
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases