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    SREBP Sterol regulatory element binding protein [ Drosophila bipectinata ]

    Gene ID: 108120438, updated on 23-Dec-2024

    Summary

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    Gene symbol
    SREBP
    Gene description
    Sterol regulatory element binding protein
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila bipectinata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See SREBP in Genome Data Viewer
    Location:
    chromosome: 3L
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_12 current DbipHiC1v2 (GCF_030179905.1) 3L NC_091738.1 (16958804..16963736)
    102 previous assembly ASM1815384v1 (GCF_018153845.1) Unplaced Scaffold NW_025063860.1 (16958347..16963280)

    Chromosome 3L - NC_091738.1Genomic Context describing neighboring genes Neighboring gene Ionotropic receptor 68b Neighboring gene Larval serum protein 2 Neighboring gene uncharacterized LOC108120439 Neighboring gene Ionotropic receptor 76a Neighboring gene Torsin interacting protein

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sterol regulatory element-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030179905.1-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DbipHiC1v2

    Genomic

    1. NC_091738.1 Reference DbipHiC1v2

      Range
      16958804..16963736
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017234116.3 → XP_017089605.2  sterol regulatory element-binding protein 1

      Conserved Domains (2) summary
      PHA03291
      Location:133 → 254
      PHA03291; envelope glycoprotein I; Provisional
      cd11394
      Location:261 → 333
      bHLHzip_SREBP; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein (SREBP) family

    2. XM_017234117.3 → XP_017089606.2  sterol regulatory element-binding protein 1

      Conserved Domains (2) summary
      PHA03291
      Location:133 → 254
      PHA03291; envelope glycoprotein I; Provisional
      cd11394
      Location:261 → 333
      bHLHzip_SREBP; basic Helix-Loop-Helix-zipper (bHLHzip) domain found in sterol regulatory element-binding protein (SREBP) family
    Nucleotide Protein Strain
    Heading Accession and Version

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