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    nonA no on or off transient A [ Drosophila bipectinata ]

    Gene ID: 108132280, updated on 15-May-2024

    Summary

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    Gene symbol
    nonA
    Gene description
    no on or off transient A
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Drosophila bipectinata
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Orthologs
    fruit fly all
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    Genomic context

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    See nonA in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    102 current ASM1815384v1 (GCF_018153845.1) Unplaced Scaffold NW_025063908.1 (602151..659082, complement)
    101 previous assembly Dbip_2.0 (GCF_000236285.1) Unplaced Scaffold NW_016087680.1 (2554..7711, complement)

    NW_025063908.1Genomic Context describing neighboring genes Neighboring gene trimeric intracellular cation channel type 1B.1 Neighboring gene uncharacterized LOC108120207 Neighboring gene furin-like protease 2 Neighboring gene phosphatidylinositol glycan anchor biosynthesis class Q Neighboring gene U2 small nuclear riboprotein auxiliary factor 50

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein no-on-transient A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Drosophila bipectinata Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1815384v1

    Genomic

    1. NW_025063908.1 Reference ASM1815384v1

      Range
      602151..659082 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043211329.1 → XP_043067264.1  protein no-on-transient A isoform X3

      Conserved Domains (5) summary
      TIGR01628
      Location:262 → 412
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      smart00360
      Location:274 → 340
      RRM; RNA recognition motif
      cd12945
      Location:418 → 517
      NOPS_NONA_like; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSP1 homologs from invertebrate species
      cd16269
      Location:555 → 566
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:479 → 585
      GBP_C; Guanylate-binding protein, C-terminal domain

    2. XM_043211328.1 → XP_043067263.1  protein no-on-transient A isoform X2

      Conserved Domains (5) summary
      TIGR01628
      Location:262 → 412
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      smart00360
      Location:274 → 340
      RRM; RNA recognition motif
      cd12945
      Location:418 → 517
      NOPS_NONA_like; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSP1 homologs from invertebrate species
      cd16269
      Location:555 → 566
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:479 → 585
      GBP_C; Guanylate-binding protein, C-terminal domain

    3. XM_043211327.1 → XP_043067262.1  protein no-on-transient A isoform X1

      Conserved Domains (5) summary
      TIGR01628
      Location:262 → 412
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
      smart00360
      Location:274 → 340
      RRM; RNA recognition motif
      cd12945
      Location:418 → 517
      NOPS_NONA_like; NOPS domain, including C-terminal coiled-coil region, in p54nrb/PSF/PSP1 homologs from invertebrate species
      cd16269
      Location:555 → 566
      GBP_C; coiled coil [structural motif]
      cl20817
      Location:479 → 585
      GBP_C; Guanylate-binding protein, C-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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