U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    rnft2 ring finger protein, transmembrane 2 [ Puntigrus tetrazona (Sumatra barb) ]

    Gene ID: 122346204, updated on 8-May-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    rnft2
    Gene description
    ring finger protein, transmembrane 2
    See related
    EnsemblRapid:ENSPRZG00000015069
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Puntigrus tetrazona
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
    Orthologs
    human zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See rnft2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current ASM1883169v1 (GCF_018831695.1) 5 NC_056703.1 (1291831..1307537, complement)

    Chromosome 5 - NC_056703.1Genomic Context describing neighboring genes Neighboring gene F-box and WD repeat domain containing 8 Neighboring gene uncharacterized LOC122346206 Neighboring gene SREBF pathway regulator in golgi 1 Neighboring gene cytosolic arginine sensor for mTORC1 subunit 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_056703.1 Chromosome 5 Reference ASM1883169v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of ERAD pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    RING finger and transmembrane domain-containing protein 2

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1883169v1 Primary Assembly

    Genomic

    1. NC_056703.1 Reference ASM1883169v1 Primary Assembly

      Range
      1291831..1307537 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043240910.1 → XP_043096845.1  RING finger and transmembrane domain-containing protein 2 isoform X1

      Related
      ENSPRZP00000026481.1, ENSPRZT00000032518.1
      Conserved Domains (1) summary
      cd16742
      Location:423 → 463
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

    2. XM_043240911.1 → XP_043096846.1  RING finger and transmembrane domain-containing protein 2 isoform X2

      Conserved Domains (1) summary
      cd16742
      Location:400 → 440
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

    3. XM_043240913.1 → XP_043096848.1  RING finger and transmembrane domain-containing protein 2 isoform X3

      Related
      ENSPRZP00000026473.1, ENSPRZT00000032510.1
      Conserved Domains (1) summary
      cd16742
      Location:380 → 420
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)

    4. XM_043240912.1 → XP_043096847.1  RING finger and transmembrane domain-containing protein 2 isoform X3

      Related
      ENSPRZP00000026466.1, ENSPRZT00000032503.1
      Conserved Domains (1) summary
      cd16742
      Location:380 → 420
      RING-HC_RNFT2; RING finger, HC subclass, found in RING finger and transmembrane domain-containing protein 2(RNFT2)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.