U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    senp3a SUMO specific peptidase 3a [ Puntigrus tetrazona (Sumatra barb) ]

    Gene ID: 122346213, updated on 22-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    senp3a
    Gene description
    SUMO specific peptidase 3a
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Puntigrus tetrazona
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Cyprinidae; Smiliogastrinae; Puntigrus
    Orthologs
    zebrafish all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See senp3a in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    100 current ASM1883169v1 (GCF_018831695.1) 5 NC_056703.1 (10926823..10933753)

    Chromosome 5 - NC_056703.1Genomic Context describing neighboring genes Neighboring gene PHD finger protein 23a Neighboring gene phospholipid scramblase 3a Neighboring gene eukaryotic translation initiation factor 4A1B Neighboring gene SRY-box transcription factor 19a

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_056703.1 Chromosome 5 Reference ASM1883169v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables deSUMOylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein desumoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sentrin-specific protease 3a

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Puntigrus tetrazona Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1883169v1 Primary Assembly

    Genomic

    1. NC_056703.1 Reference ASM1883169v1 Primary Assembly

      Range
      10926823..10933753
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043240924.1 → XP_043096859.1  sentrin-specific protease 3a

      Conserved Domains (1) summary
      COG5160
      Location:349 → 524
      ULP1; Protease, Ulp1 family [Posttranslational modification, protein turnover, chaperones]

    RNA

    1. XR_006251113.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases