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    PARVA parvin alpha [ Cervus canadensis ]

    Gene ID: 122450237, updated on 22-Mar-2024

    Summary

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    Gene symbol
    PARVA
    Gene description
    parvin alpha
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cervus canadensis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Cervidae; Cervinae; Cervus
    Orthologs
    human mouse all
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    Genomic context

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    See PARVA in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    100 current ASM1932006v1 (GCF_019320065.1) 11 NC_057396.1 (36862053..37034586, complement)

    Chromosome 11 - NC_057396.1Genomic Context describing neighboring genes Neighboring gene Ras association domain family member 10 Neighboring gene TEA domain transcription factor 1 Neighboring gene S-acyl fatty acid synthase thioesterase, medium chain-like Neighboring gene 60S ribosomal protein L6-like Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene microtubule associated monooxygenase, calponin and LIM domain containing 2 Neighboring gene dickkopf WNT signaling pathway inhibitor 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_057396.1 Chromosome 11 Reference ASM1932006v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment or maintenance of cell polarity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in substrate adhesion-dependent cell spreading IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in focal adhesion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    alpha-parvin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cervus canadensis Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1932006v1

    Genomic

    1. NC_057396.1 Reference ASM1932006v1

      Range
      36862053..37034586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_043482462.1 → XP_043338397.1  alpha-parvin isoform X1

    2. XM_043482463.1 → XP_043338398.1  alpha-parvin isoform X2

      Conserved Domains (2) summary
      cd21335
      Location:131 → 245
      CH_PARVA_rpt1; first calponin homology (CH) domain found in alpha-parvin
      cd21337
      Location:284 → 412
      CH_PARVA_rpt2; second calponin homology (CH) domain found in alpha-parvin
    Nucleotide Protein
    Heading Accession and Version

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