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    NR6A1 nuclear receptor subfamily 6 group A member 1 [ Mauremys mutica (yellowpond turtle) ]

    Gene ID: 123352584, updated on 22-Mar-2024

    Summary

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    Gene symbol
    NR6A1
    Gene description
    nuclear receptor subfamily 6 group A member 1
    Locus tag
    KIL84_022045
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Mauremys mutica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Testudinata; Testudines; Cryptodira; Durocryptodira; Testudinoidea; Geoemydidae; Geoemydinae; Mauremys
    Orthologs
    human mouse all
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    Genomic context

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    See NR6A1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    100 current ASM2049712v1 (GCF_020497125.1) 18 NC_059089.1 (26823604..27016547, complement)

    Chromosome 18 - NC_059089.1Genomic Context describing neighboring genes Neighboring gene adhesion G protein-coupled receptor D2 Neighboring gene nuclear receptor subfamily 5 group A member 1 Neighboring gene olfactomedin like 2A Neighboring gene ribosomal protein L35

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_059089.1 Chromosome 18 Reference ASM2049712v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear receptor subfamily 6 group A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Mauremys mutica Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2049712v1 Primary Assembly

    Genomic

    1. NC_059089.1 Reference ASM2049712v1 Primary Assembly

      Range
      26823604..27016547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044992926.1 → XP_044848861.1  nuclear receptor subfamily 6 group A member 1 isoform X2

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:265 → 477
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:61 → 150
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    2. XM_044992925.1 → XP_044848860.1  nuclear receptor subfamily 6 group A member 1 isoform X1

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:266 → 478
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:61 → 150
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    3. XM_044992927.1 → XP_044848862.1  nuclear receptor subfamily 6 group A member 1 isoform X3

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:252 → 464
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:47 → 136
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    4. XM_044992928.1 → XP_044848863.1  nuclear receptor subfamily 6 group A member 1 isoform X4

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:232 → 444
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:27 → 116
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    5. XM_044992929.1 → XP_044848864.1  nuclear receptor subfamily 6 group A member 1 isoform X5

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:220 → 432
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:15 → 104
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers

    6. XM_044992930.1 → XP_044848865.1  nuclear receptor subfamily 6 group A member 1 isoform X6

      UniProtKB/TrEMBL
      A0A9D3XGY2
      Conserved Domains (2) summary
      cd06953
      Location:208 → 420
      NR_LBD_DHR4_like; The ligand binding domain of orphan nuclear receptor Ecdysone-induced receptor DHR4
      cd07169
      Location:3 → 92
      NR_DBD_GCNF_like; DNA-binding domain of Germ cell nuclear factor (GCNF) F1 is composed of two C4-type zinc fingers
    Nucleotide Protein
    Heading Accession and Version

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