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    LOC122946144 uncharacterized LOC122946144 [ Bufo gargarizans (Asiatic toad) ]

    Gene ID: 122946144, updated on 30-Nov-2023

    Summary

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    Gene symbol
    LOC122946144
    Gene description
    uncharacterized LOC122946144
    See related
    EnsemblRapid:ENSBGGG00000015050
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bufo gargarizans
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Neobatrachia; Hyloidea; Bufonidae; Bufo
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    Genomic context

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    See LOC122946144 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    100 current ASM1485885v1 (GCF_014858855.1) 9 NC_058088.1 (188079072..188129463, complement)

    Chromosome 9 - NC_058088.1Genomic Context describing neighboring genes Neighboring gene leucine-rich repeat-containing protein 38-like Neighboring gene CCN family member 1-like Neighboring gene uncharacterized LOC122946154 Neighboring gene discoidin domain-containing receptor 2-like Neighboring gene cholesterol 7-desaturase nvd-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058088.1 Chromosome 9 Reference ASM1485885v1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in extracellular region IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein LOC122946144

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Bufo gargarizans Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM1485885v1 Primary Assembly

    Genomic

    1. NC_058088.1 Reference ASM1485885v1 Primary Assembly

      Range
      188079072..188129463 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044305542.1 → XP_044161477.1  uncharacterized protein LOC122946144 isoform X3

      Conserved Domains (2) summary
      PRK06003
      Location:523 → 601
      flgB; flagellar basal body rod protein FlgB; Reviewed
      cd05382
      Location:402 → 533
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

    2. XM_044305540.1 → XP_044161475.1  uncharacterized protein LOC122946144 isoform X3

      Related
      ENSBGGP00000019809.1, ENSBGGT00000022024.1
      Conserved Domains (2) summary
      PRK06003
      Location:523 → 601
      flgB; flagellar basal body rod protein FlgB; Reviewed
      cd05382
      Location:402 → 533
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

    3. XM_044305539.1 → XP_044161474.1  uncharacterized protein LOC122946144 isoform X2

      Conserved Domains (2) summary
      PRK06003
      Location:570 → 648
      flgB; flagellar basal body rod protein FlgB; Reviewed
      cd05382
      Location:449 → 580
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

    4. XM_044305538.1 → XP_044161473.1  uncharacterized protein LOC122946144 isoform X1

      Conserved Domains (2) summary
      PRK06003
      Location:571 → 649
      flgB; flagellar basal body rod protein FlgB; Reviewed
      cd05382
      Location:450 → 581
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins

    5. XM_044305543.1 → XP_044161478.1  uncharacterized protein LOC122946144 isoform X3

      Conserved Domains (2) summary
      PRK06003
      Location:523 → 601
      flgB; flagellar basal body rod protein FlgB; Reviewed
      cd05382
      Location:402 → 533
      CAP_GAPR1-like; CAP (cysteine-rich secretory proteins, antigen 5, and pathogenesis-related 1 proteins) domain of Golgi-associated plant pathogenesis-related protein 1 and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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