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    LUA64_RS01645 sensor domain-containing diguanylate cyclase [ Eggerthella lenta ]

    Gene ID: 69509812, updated on 13-Apr-2023

    Summary

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    Gene symbol
    LUA64_RS01645
    Gene description
    sensor domain-containing diguanylate cyclase
    Locus tag
    LUA64_RS01645
    Gene type
    protein coding
    Organism
    Eggerthella lenta (strain: APC055-529-1D, nat-host: Homo sapiens)
    Lineage
    Bacteria; Actinomycetota; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella
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    Genomic context

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    NZ_CP089331.1Genomic Context describing neighboring genes Neighboring gene ABC transporter ATP-binding protein Neighboring gene MDR family MFS transporter Neighboring gene LuxR C-terminal-related transcriptional regulator Neighboring gene FAD-dependent oxidoreductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NZ_CP089331.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Selective Isolation of Eggerthella lenta from Human Faeces and Characterisation of the Species Prophage Diversity. Buttimer C, et al. Microorganisms, 2022 Jan 17. PMID 35056644, Free PMC Article
    2. The PAS fold. A redefinition of the PAS domain based upon structural prediction. Hefti MH, et al. Eur J Biochem, 2004 Mar. PMID 15009198
    3. PAS: a multifunctional domain family comes to light. Ponting CP, et al. Curr Biol, 1997 Nov 1. PMID 9382818
    4. GGDEF domain is homologous to adenylyl cyclase. Pei J, et al. Proteins, 2001 Feb 1. PMID 11119645

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    sensor domain-containing diguanylate cyclase
    WP_227101023.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NZ_CP089331.1 Reference assembly

      Range
      412324..413559
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_227101023.1 MULTISPECIES: sensor domain-containing diguanylate cyclase [Eggerthella]

      Conserved Domains (2) summary
      cd01949
      Location:245 → 402
      GGDEF; Diguanylate-cyclase (DGC) or GGDEF domain
      COG2202
      Location:14 → 236
      PAS; PAS domain [Signal transduction mechanisms]