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    rno PHD finger protein rhinoceros [ Chrysoperla carnea ]

    Gene ID: 123295726, updated on 12-Oct-2024

    Summary

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    Gene symbol
    rno
    Gene description
    PHD finger protein rhinoceros
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Chrysoperla carnea
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Neuroptera; Hemerobiiformia; Chrysopidae; Chrysopinae; Chrysoperla
    Orthologs
    fruit fly all
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    Genomic context

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    See rno in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    100 current inChrCarn1.1 (GCF_905475395.1) 3 NC_058339.1 (9525997..9539626, complement)

    Chromosome 3 - NC_058339.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein on ecdysone puffs-like Neighboring gene protein nervous wreck Neighboring gene ATP-binding cassette sub-family G member 4-like Neighboring gene AFG3 like matrix AAA peptidase subunit 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_058339.1 Chromosome 3 Reference inChrCarn1.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PHD finger protein rhinoceros

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Chrysoperla carnea Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference inChrCarn1.1

    Genomic

    1. NC_058339.1 Reference inChrCarn1.1

      Range
      9525997..9539626 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044877161.1 → XP_044733096.1  PHD finger protein rhinoceros

      Conserved Domains (3) summary
      COG5141
      Location:166 → 544
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      TIGR03835
      Location:1142 → 1447
      termin_org_DnaJ; terminal organelle assembly protein TopJ
      cd15707
      Location:284 → 397
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins

    2. XM_044877163.1 → XP_044733098.1  PHD finger protein rhinoceros

      Conserved Domains (3) summary
      COG5141
      Location:166 → 544
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      TIGR03835
      Location:1142 → 1447
      termin_org_DnaJ; terminal organelle assembly protein TopJ
      cd15707
      Location:284 → 397
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins

    3. XM_044877162.1 → XP_044733097.1  PHD finger protein rhinoceros

      Conserved Domains (3) summary
      COG5141
      Location:166 → 544
      COG5141; PHD zinc finger-containing protein [General function prediction only]
      TIGR03835
      Location:1142 → 1447
      termin_org_DnaJ; terminal organelle assembly protein TopJ
      cd15707
      Location:284 → 397
      ePHD_RNO; Extended PHD finger found in Drosophila melanogaster PHD finger protein rhinoceros (RNO) and similar proteins
    Nucleotide Protein
    Heading Accession and Version

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