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    LOC110576330 neutral alpha-glucosidase AB [ Neomonachus schauinslandi (Hawaiian monk seal) ]

    Gene ID: 110576330, updated on 16-Nov-2023

    Summary

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    Gene symbol
    LOC110576330
    Gene description
    neutral alpha-glucosidase AB
    See related
    EnsemblRapid:ENSNSCG00000002369
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neomonachus schauinslandi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
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    Genomic context

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    See LOC110576330 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    28
    Annotation release Status Assembly Chr Location
    101 current ASM220157v2 (GCF_002201575.2) 11 NC_058413.1 (9141740..9162229)
    100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734298.1 (42066560..42087055, complement)

    Chromosome 11 - NC_058413.1Genomic Context describing neighboring genes Neighboring gene citrate synthase lysine methyltransferase Neighboring gene small nucleolar RNA SNORA57 Neighboring gene chromosome 11 C11orf98 homolog Neighboring gene beta-1,3-glucuronyltransferase 3 Neighboring gene retinal outer segment membrane protein 1 Neighboring gene EMAP like 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables carbohydrate binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables glucan 1,3-alpha-glucosidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-glycan processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of glucosidase II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neutral alpha-glucosidase AB
    Names
    integrator complex subunit 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM220157v2

    Genomic

    1. NC_058413.1 Reference ASM220157v2

      Range
      9141740..9162229
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_044919837.1 → XP_044775772.1  neutral alpha-glucosidase AB isoform X1

      UniProtKB/TrEMBL
      A0A8M1MPK2
      Conserved Domains (2) summary
      cd06603
      Location:902 → 1369
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:760 → 902
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

    2. XM_044919838.1 → XP_044775773.1  neutral alpha-glucosidase AB isoform X2

      UniProtKB/TrEMBL
      A0A8M1MSU1
      Conserved Domains (2) summary
      cd06603
      Location:406 → 873
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:264 → 406
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

    3. XM_021685485.2 → XP_021541160.1  neutral alpha-glucosidase AB isoform X3

      UniProtKB/TrEMBL
      A0A2Y9GTI0
      Related
      ENSNSCP00000002839.1
      Conserved Domains (3) summary
      cd06603
      Location:384 → 851
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:242 → 384
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
      pfam17137
      Location:827 → 896
      DUF5110; Domain of unknown function (DUF5110)

    4. XM_044919839.1 → XP_044775774.1  neutral alpha-glucosidase AB isoform X5

      UniProtKB/TrEMBL
      A0A8M1MXZ7
      Conserved Domains (2) summary
      cd06603
      Location:292 → 759
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:150 → 292
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

    5. XM_044919841.1 → XP_044775776.1  neutral alpha-glucosidase AB isoform X6

      UniProtKB/TrEMBL
      A0A8M1MPJ9
      Conserved Domains (2) summary
      cd06603
      Location:270 → 737
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:128 → 270
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)

    6. XM_021685486.2 → XP_021541161.1  neutral alpha-glucosidase AB isoform X4

      UniProtKB/TrEMBL
      A0A2Y9GPN0
      Conserved Domains (3) summary
      cd06603
      Location:332 → 799
      GH31_GANC_GANAB_alpha; neutral alpha-glucosidase C, neutral alpha-glucosidase AB
      cd14752
      Location:190 → 332
      GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
      pfam17137
      Location:775 → 844
      DUF5110; Domain of unknown function (DUF5110)
    Nucleotide Protein
    Heading Accession and Version

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