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    CG8960 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 38280, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG8960provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0035315
    Locus tag
    Dmel_CG8960
    See related
    AllianceGenome:FB:FBgn0035315
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    Dmel\CG8960
    Summary
    Is expressed in several structures, including anterior endoderm; anterior endoderm anlage; dorsal ectoderm anlage; foregut anlage; and mesoderm. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG8960 in Genome Data Viewer
    Location:
    62D2-62D2; 3-2 cM
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (2197013..2198089)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (2197013..2198089)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Outer segment 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genes encoding novel secreted and transmembrane proteins are temporally and spatially regulated during Drosophila melanogaster embryogenesis. Zúñiga A, et al. BMC Biol, 2009 Sep 22. PMID 19772636, Free PMC Article
    2. Polymorphism and Divergence of Novel Gene Expression Patterns in Drosophila melanogaster. Cridland JM, et al. Genetics, 2020 Sep. PMID 32737121, Free PMC Article
    3. Accelerated sequence divergence of conserved genomic elements in Drosophila melanogaster. Holloway AK, et al. Genome Res, 2008 Oct. PMID 18583644, Free PMC Article
    4. Developmental control of nuclear morphogenesis and anchoring by charleston, identified in a functional genomic screen of Drosophila cellularisation. Pilot F, et al. Development, 2006 Feb. PMID 16421189
    5. Drosophila anti-nematode and antibacterial immune regulators revealed by RNA-Seq. Castillo JC, et al. BMC Genomics, 2015 Jul 11. PMID 26162375, Free PMC Article

    See all (25) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8960-PA
    CG8960-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      2197013..2198089
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_139441.3 → NP_647698.1  uncharacterized protein Dmel_CG8960, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_647698.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9W042
      Related
      FBpp0072750

    2. NM_167937.2 → NP_728719.1  uncharacterized protein Dmel_CG8960, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_728719.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8IRF6
      Related
      FBpp0072751
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8IRF6 Q8IRF6
    Q9W042 Q9W042

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