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    LOC102608895 protein PHOX1 [ Citrus sinensis (sweet orange) ]

    Gene ID: 102608895, updated on 23-Nov-2023

    Summary

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    Gene symbol
    LOC102608895
    Gene description
    protein PHOX1
    Locus tag
    KPL70_027407
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Citrus sinensis
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Sapindales; Rutaceae; Aurantioideae; Citrus
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    Genomic context

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    See LOC102608895 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    103 current DVS_A1.0 (GCF_022201045.2) 9 NC_068564.1 (31127200..31132043, complement)
    102 previous assembly Csi_valencia_1.0 (GCF_000317415.1) 4 NC_023049.1 (3018355..3023183)

    Chromosome 9 - NC_068564.1Genomic Context describing neighboring genes Neighboring gene protein S-acyltransferase 24 Neighboring gene uncharacterized LOC102609559 Neighboring gene vacuolar protein sorting-associated protein 51 homolog Neighboring gene protein OS-9 homolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein PHOX1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Citrus sinensis Annotation Release 103 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference DVS_A1.0 Primary Assembly

    Genomic

    1. NC_068564.1 Reference DVS_A1.0 Primary Assembly

      Range
      31127200..31132043 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025097503.2 → XP_024953271.1  protein PHOX1

      Conserved Domains (3) summary
      smart00666
      Location:263 → 338
      PB1; PB1 domain
      sd00006
      Location:45 → 73
      TPR; TPR repeat [structural motif]
      cl26005
      Location:48 → 193
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional

    2. XM_006474311.4 → XP_006474374.1  protein PHOX1

      See identical proteins and their annotated locations for XP_006474374.1

      Conserved Domains (3) summary
      smart00666
      Location:263 → 338
      PB1; PB1 domain
      sd00006
      Location:45 → 73
      TPR; TPR repeat [structural motif]
      cl26005
      Location:48 → 193
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional

    3. XM_006474310.4 → XP_006474373.1  protein PHOX1

      See identical proteins and their annotated locations for XP_006474373.1

      Conserved Domains (3) summary
      smart00666
      Location:263 → 338
      PB1; PB1 domain
      sd00006
      Location:45 → 73
      TPR; TPR repeat [structural motif]
      cl26005
      Location:48 → 193
      PLN03088; SGT1, suppressor of G2 allele of SKP1; Provisional
    Nucleotide Protein
    Heading Accession and Version

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