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    BBTN1 butyrophilin 1, MHCB region [ Gallus gallus (chicken) ]

    Gene ID: 768783, updated on 17-Aug-2024

    Summary

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    Official Symbol
    BBTN1provided by CGNC
    Official Full Name
    butyrophilin 1, MHCB regionprovided by CGNC
    Primary source
    CGNC:54750
    See related
    Ensembl:ENSGALG00010002866
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    BTN1; B-BTN1; B-BNTN1; butyrophilin
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    Genomic context

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    See BBTN1 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    41
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 16 NC_052547.1 (2150312..2164504)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 16 NC_052588.1 (1051440..1065631)

    Chromosome 16 - NC_052547.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 41, MHCB region Neighboring gene receptor for activated C kinase 1 Neighboring gene butyrophilin 2, MHCB region Neighboring gene transfer RNA leucine (anticodon AAG)

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Extended gene map reveals tripartite motif, C-type lectin, and Ig superfamily type genes within a subregion of the chicken MHC-B affecting infectious disease. Shiina T, et al. J Immunol, 2007 Jun 1. PMID 17513765
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase TRIM39; tripartite motif-containing protein 10
    Names
    B-butyrophilin 1
    BTN1 stands for 'B-butyrophilin 1
    BTN1, MHC-B region
    E3 ubiquitin-protein ligase TRIM39-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052547.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2150312..2164504
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046901544.1 → XP_046757500.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    2. XM_025155866.3 → XP_025011634.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    3. XM_040648761.2 → XP_040504695.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    4. XM_015295003.4 → XP_015150489.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    5. XM_046901543.1 → XP_046757499.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    6. XM_015295001.4 → XP_015150487.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    7. XM_015295004.4 → XP_015150490.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    8. XM_046901542.1 → XP_046757498.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    9. XM_015295002.3 → XP_015150488.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    10. XM_046901552.1 → XP_046757508.1  tripartite motif-containing protein 10 isoform X6

    11. XM_046901553.1 → XP_046757509.1  E3 ubiquitin-protein ligase TRIM39 isoform X7

    12. XM_046901556.1 → XP_046757512.1  tripartite motif-containing protein 10 isoform X10

    13. XM_046901558.1 → XP_046757514.1  E3 ubiquitin-protein ligase TRIM39 isoform X12

    14. XM_046901557.1 → XP_046757513.1  E3 ubiquitin-protein ligase TRIM39 isoform X11

    15. XM_046901551.1 → XP_046757507.1  E3 ubiquitin-protein ligase TRIM39 isoform X5

    16. XM_046901546.1 → XP_046757502.1  E3 ubiquitin-protein ligase TRIM39 isoform X2

    17. XM_046901554.1 → XP_046757510.1  E3 ubiquitin-protein ligase TRIM39 isoform X8

    18. XM_046901547.1 → XP_046757503.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    19. XM_046901555.1 → XP_046757511.1  E3 ubiquitin-protein ligase TRIM39 isoform X9

    20. XM_046901550.1 → XP_046757506.1  E3 ubiquitin-protein ligase TRIM39 isoform X4

    21. XM_015295005.3 → XP_015150491.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Related
      ENSGALP00010004066.1, ENSGALT00010006638.1
      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    22. XM_046901548.1 → XP_046757504.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    23. XM_040648760.2 → XP_040504694.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    24. XM_046901549.1 → XP_046757505.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052588.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1051440..1065631
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046928580.1 → XP_046784536.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    2. XM_040685344.2 → XP_040541278.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    3. XM_040685349.2 → XP_040541283.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    4. XM_040685345.2 → XP_040541279.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    5. XM_046928579.1 → XP_046784535.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    6. XM_040685342.2 → XP_040541276.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    7. XM_040685346.2 → XP_040541280.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    8. XM_046928578.1 → XP_046784534.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

    9. XM_040685343.2 → XP_040541277.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    10. XM_046928588.1 → XP_046784544.1  tripartite motif-containing protein 10 isoform X6

    11. XM_046928589.1 → XP_046784545.1  E3 ubiquitin-protein ligase TRIM39 isoform X7

    12. XM_046928592.1 → XP_046784548.1  tripartite motif-containing protein 10 isoform X10

    13. XM_046928594.1 → XP_046784550.1  E3 ubiquitin-protein ligase TRIM39 isoform X12

    14. XM_046928593.1 → XP_046784549.1  E3 ubiquitin-protein ligase TRIM39 isoform X11

    15. XM_046928587.1 → XP_046784543.1  E3 ubiquitin-protein ligase TRIM39 isoform X5

    16. XM_046928581.1 → XP_046784537.1  E3 ubiquitin-protein ligase TRIM39 isoform X2

    17. XM_046928590.1 → XP_046784546.1  E3 ubiquitin-protein ligase TRIM39 isoform X8

    18. XM_046928582.1 → XP_046784538.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    19. XM_046928591.1 → XP_046784547.1  E3 ubiquitin-protein ligase TRIM39 isoform X9

    20. XM_046928586.1 → XP_046784542.1  E3 ubiquitin-protein ligase TRIM39 isoform X4

    21. XM_040685347.2 → XP_040541281.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    22. XM_046928583.1 → XP_046784539.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    23. XM_040685348.2 → XP_040541282.1  E3 ubiquitin-protein ligase TRIM39 isoform X1

      Conserved Domains (2) summary
      TIGR02169
      Location:4 → 244
      SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
      cd12888
      Location:259 → 425
      SPRY_PRY_TRIM7_like; PRY/SPRY domain in tripartite motif-binding protein 7 (TRIM7)-like, including TRIM7, TRIM10, TRIM15, TRIM26, TRIM39, TRIM41

    24. XM_046928584.1 → XP_046784540.1  E3 ubiquitin-protein ligase TRIM39 isoform X3

    Nucleotide Protein Strain
    Heading Accession and Version

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