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    RAB9A RAB9A, member RAS oncogene family [ Gallus gallus (chicken) ]

    Gene ID: 418635, updated on 17-Aug-2024

    Summary

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    Symbol
    RAB9Aprovided by CGNC
    Full Name
    RAB9A, member RAS oncogene familyprovided by CGNC
    Primary source
    CGNC:50812
    See related
    Ensembl:ENSGALG00010002448
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    RAB9
    Orthologs
    human mouse all
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    Genomic context

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    See RAB9A in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (123095625..123118383, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (123071759..123081629, complement) , (123058828..123066949, complement)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene glycoprotein M6B Neighboring gene OFD1, centriole and centriolar satellite protein Neighboring gene trafficking protein particle complex 2 Neighboring gene maestro heat-like repeat-containing protein family member 2A Neighboring gene maestro heat-like repeat-containing protein family member 2B like 27

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Rab protein signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde transport, endosome to Golgi IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in late endosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in lysosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in phagocytic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ras-related protein Rab-9A
    Names
    RAB9, member RAS oncogene family

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001008678.2 → NP_001008678.1  ras-related protein Rab-9A

      See identical proteins and their annotated locations for NP_001008678.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000023
      UniProtKB/TrEMBL
      Q5ZMI5
      Related
      ENSGALP00010003482.1, ENSGALT00010005643.1
      Conserved Domains (1) summary
      cd04116
      Location:4 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      123095625..123118383 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015273566.4 → XP_015129052.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5
      Related
      ENSGALP00010003488.1, ENSGALT00010005649.1
      Conserved Domains (1) summary
      cd04116
      Location:4 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    2. XM_015273561.4 → XP_015129047.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5
      Conserved Domains (1) summary
      cd04116
      Location:4 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    3. XM_040698873.2 → XP_040554807.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5
      Related
      ENSGALP00010003487.1, ENSGALT00010005648.1
      Conserved Domains (1) summary
      cd04116
      Location:4 → 172
      Rab9; Rab GTPase family 9 (Rab9)

    RNA

    1. XR_006939173.1 RNA Sequence

    2. XR_006939171.1 RNA Sequence

    3. XR_006939175.1 RNA Sequence

    4. XR_006939180.1 RNA Sequence

    5. XR_006939174.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      123058828..123066949 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    2. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      123071759..123081629 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908007.1 → XP_046763963.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5

    2. XM_046908006.1 → XP_046763962.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5

    3. XM_046908008.1 → XP_046763964.1  ras-related protein Rab-9A isoform X1

      UniProtKB/TrEMBL
      Q5ZMI5
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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