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    NDEL1 nudE neurodevelopment protein 1 like 1 [ Gallus gallus (chicken) ]

    Gene ID: 417317, updated on 3-Dec-2024

    Summary

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    Symbol
    NDEL1provided by CGNC
    Full Name
    nudE neurodevelopment protein 1 like 1provided by CGNC
    Primary source
    CGNC:787
    See related
    Ensembl:ENSGALG00010029340
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See NDEL1 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 18 NC_052549.1 (2321490..2344414)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 18 NC_052590.1 (1890945..1913867)

    Chromosome 18 - NC_052549.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107054730 Neighboring gene ring finger protein 222 Neighboring gene myosin, heavy chain 10, non-muscle Neighboring gene coiled-coil domain containing 42

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
    2. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables microtubule binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in centrosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in chromosome segregation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of chromosome localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of mitotic spindle orientation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in microtubule nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic centrosome separation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of neuron projection development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle transport along microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centrosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of kinesin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in kinetochore IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    nuclear distribution protein nudE-like 1
    Names
    nudE nuclear distribution E homolog (A. nidulans)-like 1
    nudE nuclear distribution gene E homolog like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001030696.2 → NP_001025867.1  nuclear distribution protein nudE-like 1

      See identical proteins and their annotated locations for NP_001025867.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000315
      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0
      Related
      ENSGALP00010043654.1, ENSGALT00010070963.1
      Conserved Domains (2) summary
      TIGR02168
      Location:27 → 193
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam04880
      Location:135 → 309
      NUDE_C; NUDE protein, C-terminal conserved region

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052549.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2321490..2344414
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040649474.2 → XP_040505408.1  nuclear distribution protein nudE-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PRW9
      Related
      ENSGALP00010043652.1, ENSGALT00010070961.1
      Conserved Domains (2) summary
      TIGR02168
      Location:32 → 198
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam04880
      Location:140 → 314
      NUDE_C; NUDE protein, C-terminal conserved region

    2. XM_046902002.1 → XP_046757958.1  nuclear distribution protein nudE-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PRW9

    3. XM_025141579.3 → XP_024997347.1  nuclear distribution protein nudE-like 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PRW9
      Conserved Domains (2) summary
      pfam04880
      Location:140 → 314
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:32 → 198
      SMC_N; RecF/RecN/SMC N terminal domain

    4. XM_025141580.3 → XP_024997348.1  nuclear distribution protein nudE-like 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V1ACD0
      Conserved Domains (2) summary
      pfam04880
      Location:140 → 314
      NUDE_C; NUDE protein, C-terminal conserved region
      cl25732
      Location:32 → 198
      SMC_N; RecF/RecN/SMC N terminal domain

    5. XM_046902003.1 → XP_046757959.1  nuclear distribution protein nudE-like 1 isoform X2

      UniProtKB/TrEMBL
      A0A452J851, A0A8V1ACD0
      Related
      ENSGALP00010043651.1, ENSGALT00010070960.1

    6. XM_046902004.1 → XP_046757960.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0

    7. XM_040649477.2 → XP_040505411.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0
      Conserved Domains (2) summary
      TIGR02168
      Location:27 → 193
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam04880
      Location:135 → 309
      NUDE_C; NUDE protein, C-terminal conserved region

    8. XM_025141578.3 → XP_024997346.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0
      Conserved Domains (2) summary
      TIGR02168
      Location:27 → 193
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam04880
      Location:135 → 309
      NUDE_C; NUDE protein, C-terminal conserved region

    9. XM_040649480.2 → XP_040505414.1  nuclear distribution protein nudE-like 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PRW9, A0A8V1AJN3
      Related
      ENSGALP00010043653.1, ENSGALT00010070962.1
      Conserved Domains (1) summary
      TIGR02168
      Location:27 → 193
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type

    10. XM_040649479.2 → XP_040505413.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0
      Conserved Domains (2) summary
      TIGR02168
      Location:27 → 193
      SMC_prok_B; chromosome segregation protein SMC, common bacterial type
      pfam04880
      Location:135 → 309
      NUDE_C; NUDE protein, C-terminal conserved region

    RNA

    1. XR_006931709.1 RNA Sequence

    2. XR_006931710.1 RNA Sequence

    3. XR_005840596.2 RNA Sequence

    4. XR_005840594.2 RNA Sequence

    5. XR_005840597.2 RNA Sequence

    6. XR_006931711.1 RNA Sequence

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052590.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      1890945..1913867
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046929307.1 → XP_046785263.1  nuclear distribution protein nudE-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PRW9

    2. XM_046929305.1 → XP_046785261.1  nuclear distribution protein nudE-like 1 isoform X1

      UniProtKB/TrEMBL
      A0A1D5PRW9

    3. XM_046929313.1 → XP_046785269.1  nuclear distribution protein nudE-like 1 isoform X4

      UniProtKB/TrEMBL
      A0A1D5PRW9

    4. XM_046929316.1 → XP_046785272.1  nuclear distribution protein nudE-like 1 isoform X6

      UniProtKB/TrEMBL
      A0A8V1ACD0

    5. XM_046929308.1 → XP_046785264.1  nuclear distribution protein nudE-like 1 isoform X2

      UniProtKB/TrEMBL
      A0A452J851, A0A8V1ACD0

    6. XM_046929311.1 → XP_046785267.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0

    7. XM_046929309.1 → XP_046785265.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0

    8. XM_046929310.1 → XP_046785266.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0

    9. XM_046929315.1 → XP_046785271.1  nuclear distribution protein nudE-like 1 isoform X5

      UniProtKB/TrEMBL
      A0A1D5PRW9, A0A8V1AJN3

    10. XM_046929312.1 → XP_046785268.1  nuclear distribution protein nudE-like 1 isoform X3

      UniProtKB/Swiss-Prot
      Q5ZKH4
      UniProtKB/TrEMBL
      A0A8V1ACD0

    RNA

    1. XR_006936500.1 RNA Sequence

    2. XR_006936505.1 RNA Sequence

    3. XR_006936503.1 RNA Sequence

    4. XR_006936504.1 RNA Sequence

    5. XR_006936502.1 RNA Sequence

    6. XR_006936501.1 RNA Sequence

    7. XR_006936506.1 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q5ZKH4.1 GenPept UniProtKB/Swiss-Prot:Q5ZKH4

    Gene LinkOut

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