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    PLS1 plastin 1 [ Gallus gallus (chicken) ]

    Gene ID: 396291, updated on 3-Dec-2024

    Summary

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    Symbol
    PLS1provided by CGNC
    Full Name
    plastin 1provided by CGNC
    Primary source
    CGNC:1904
    See related
    Ensembl:ENSGALG00010015774
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    plastin-1
    Orthologs
    human mouse all
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    Genomic context

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    See PLS1 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 9 NC_052540.1 (10160485..10198792)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 9 NC_052581.1 (9961781..10000102)

    Chromosome 9 - NC_052540.1Genomic Context describing neighboring genes Neighboring gene 5'-3' exoribonuclease 1 Neighboring gene ATR serine/threonine kinase Neighboring gene transient receptor potential cation channel subfamily C member 1 Neighboring gene procollagen C-endopeptidase enhancer 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fimbrin is a homologue of the cytoplasmic phosphoprotein plastin and has domains homologous with calmodulin and actin gelation proteins. de Arruda MV, et al. J Cell Biol, 1990 Sep. PMID 2391360, Free PMC Article
    2. Ca(2+)-regulated actin and phospholipid binding protein (68 kD-protein) from bovine liver: identification as a homologue for annexin VI and intracellular localization. Hosoya H, et al. Cell Motil Cytoskeleton, 1992. PMID 1423665
    3. Proteomic studies of Syk-interacting proteins using a novel amine-specific isotope tag and GFP nanotrap. Galan JA, et al. J Am Soc Mass Spectrom, 2011 Feb. PMID 21472591, Free PMC Article
    4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
    5. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament bundle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in actin filament network formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in actin filament bundle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plastin-1
    Names
    I-plastin
    fimbrin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001396115.1 → NP_001383044.1  plastin-1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000240
      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Related
      ENSGALP00010021919.1, ENSGALT00010037994.1
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    2. NM_001396116.1 → NP_001383045.1  plastin-1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000240
      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    3. NM_001396117.1 → NP_001383046.1  plastin-1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000240
      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    4. NM_001396118.1 → NP_001383047.1  plastin-1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000240
      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Related
      ENSGALP00010021912.1, ENSGALT00010037981.1
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    5. NM_205347.2 → NP_990678.1  plastin-1

      See identical proteins and their annotated locations for NP_990678.1

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000240
      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052540.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      10160485..10198792
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046898340.1 → XP_046754296.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    2. XM_046898339.1 → XP_046754295.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    3. XM_040705483.2 → XP_040561417.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    4. XM_040705486.2 → XP_040561420.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    5. XM_046898335.1 → XP_046754291.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    6. XM_046898337.1 → XP_046754293.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    7. XM_040705484.2 → XP_040561418.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Conserved Domains (3) summary
      COG5069
      Location:20 → 622
      SAC6; Ca2+-binding actin-bundling protein fimbrin/plastin (EF-Hand superfamily) [Cytoskeleton]
      cd21323
      Location:100 → 244
      CH_PLS1_rpt1; first calponin homology (CH) domain found in plastin-1
      cd21329
      Location:392 → 509
      CH_PLS1_rpt3; third calponin homology (CH) domain found in plastin-1

    8. XM_046898338.1 → XP_046754294.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    9. XM_046898336.1 → XP_046754292.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
      Related
      ENSGALP00010021917.1, ENSGALT00010037990.1

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052581.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9961781..10000102
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046923682.1 → XP_046779638.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    2. XM_046923676.1 → XP_046779632.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    3. XM_046923679.1 → XP_046779635.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    4. XM_046923675.1 → XP_046779631.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    5. XM_046923680.1 → XP_046779636.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    6. XM_046923681.1 → XP_046779637.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    7. XM_046923678.1 → XP_046779634.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67

    8. XM_046923683.1 → XP_046779639.1  plastin-1 isoform X1

      UniProtKB/Swiss-Prot
      P19179
      UniProtKB/TrEMBL
      A0A8V0YT67
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P19179.1 GenPept UniProtKB/Swiss-Prot:P19179

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