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    LOC430766 transitional endoplasmic reticulum ATPase-like [ Gallus gallus (chicken) ]

    Gene ID: 430766, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC430766
    Gene description
    transitional endoplasmic reticulum ATPase-like
    See related
    Ensembl:ENSGALG00010013319
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    TERAL2
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    Genomic context

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    See LOC430766 in Genome Data Viewer
    Location:
    chromosome: W
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) W NC_052571.1 (8525083..8579941, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) W NC_059535.1 (8525083..8579941, complement)

    Chromosome W - NC_052571.1Genomic Context describing neighboring genes Neighboring gene thioredoxin-like protein 1 Neighboring gene uncharacterized LOC121108215 Neighboring gene uncharacterized LOC112530491 Neighboring gene uncharacterized LOC124417492 Neighboring gene uncharacterized LOC112530489

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Conserved BK channel-protein interactions reveal signals relevant to cell death and survival. Sokolowski B, et al. PLoS One, 2011. PMID 22174833, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in autophagosome maturation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic spindle disassembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retrograde protein transport, ER to cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of VCP-NPL4-UFD1 AAA ATPase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transitional endoplasmic reticulum ATPase
    Names
    transitional endoplasmic reticulum ATPase-like 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052571.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      8525083..8579941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_025144579.3 → XP_025000347.1  transitional endoplasmic reticulum ATPase isoform X2

      UniProtKB/TrEMBL
      A0A182C5X0, A0A1D5NTY5, A0A8V0YLQ9, A0A8V0YLU6
      Related
      ENSGALP00010018848.1, ENSGALT00010032058.1
      Conserved Domains (1) summary
      TIGR01243
      Location:25 → 764
      CDC48; AAA family ATPase, CDC48 subfamily

    2. XM_040655265.2 → XP_040511199.1  transitional endoplasmic reticulum ATPase isoform X1

      UniProtKB/TrEMBL
      A0A8V0YLU6
      Conserved Domains (1) summary
      TIGR01243
      Location:25 → 767
      CDC48; AAA family ATPase, CDC48 subfamily

    3. XM_046905156.1 → XP_046761112.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1

    4. XM_040655266.2 → XP_040511200.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1
      Related
      ENSGALP00010018862.1, ENSGALT00010032072.1
      Conserved Domains (1) summary
      TIGR01243
      Location:1 → 722
      CDC48; AAA family ATPase, CDC48 subfamily

    5. XM_040655268.2 → XP_040511202.1  transitional endoplasmic reticulum ATPase isoform X4

      UniProtKB/TrEMBL
      A0A1D5PF52, A0A8V0YLQ9
      Related
      ENSGALP00010018843.1, ENSGALT00010032053.1
      Conserved Domains (1) summary
      TIGR01243
      Location:1 → 719
      CDC48; AAA family ATPase, CDC48 subfamily

    6. XM_040655267.2 → XP_040511201.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1
      Conserved Domains (1) summary
      TIGR01243
      Location:1 → 722
      CDC48; AAA family ATPase, CDC48 subfamily

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_059535.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      8525083..8579941 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046934580.1 → XP_046790536.1  transitional endoplasmic reticulum ATPase isoform X2

      UniProtKB/TrEMBL
      A0A182C5X0, A0A1D5NTY5, A0A8V0YLQ9, A0A8V0YLU6

    2. XM_046934579.1 → XP_046790535.1  transitional endoplasmic reticulum ATPase isoform X1

      UniProtKB/TrEMBL
      A0A8V0YLU6

    3. XM_046934582.1 → XP_046790538.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1

    4. XM_046934581.1 → XP_046790537.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1

    5. XM_046934584.1 → XP_046790540.1  transitional endoplasmic reticulum ATPase isoform X4

      UniProtKB/TrEMBL
      A0A1D5PF52, A0A8V0YLQ9

    6. XM_046934583.1 → XP_046790539.1  transitional endoplasmic reticulum ATPase isoform X3

      UniProtKB/TrEMBL
      A0A8V0YLQ9, A0A8V0YRR1
    Nucleotide Protein Strain
    Heading Accession and Version

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