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    CG8671 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 35400, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG8671provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0032938
    Locus tag
    Dmel_CG8671
    See related
    AllianceGenome:FB:FBgn0032938
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-WO0118547.182; Dmel\CG8671
    Summary
    Involved in dsRNA transport. Is expressed in organism. Orthologous to human EEIG2 (EEIG family member 2) and EEIG1 (estrogen-induced osteoclastogenesis regulator 1). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG8671 in Genome Data Viewer
    Location:
    39C1-39C1; 2-54 cM
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 2L NT_033779.5 (21262956..21282790)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 2L NT_033779.4 (21262956..21282790)

    Chromosome 2L - NT_033779.5Genomic Context describing neighboring genes Neighboring gene mir-9374 stem loop Neighboring gene Hormone receptor-like in 39 Neighboring gene lethal (2) k14505 Neighboring gene mir-4974 stem loop Neighboring gene pseudo Neighboring gene mondo Neighboring gene Gustatory receptor 39a

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Piwi Is Required during Drosophila Embryogenesis to License Dual-Strand piRNA Clusters for Transposon Repression in Adult Ovaries. Akkouche A, et al. Mol Cell, 2017 May 4. PMID 28457744
    2. The exon junction complex is required for definition and excision of neighboring introns in Drosophila. Hayashi R, et al. Genes Dev, 2014 Aug 15. PMID 25081352, Free PMC Article
    3. Coordination of alternative splicing and alternative polyadenylation revealed by targeted long read sequencing. Zhang Z, et al. Nat Commun, 2023 Sep 7. PMID 37679364, Free PMC Article
    4. The endocytic pathway mediates cell entry of dsRNA to induce RNAi silencing. Saleh MC, et al. Nat Cell Biol, 2006 Aug. PMID 16862146, Free PMC Article
    5. Genome-Wide Association Analyses Point to Candidate Genes for Electric Shock Avoidance in Drosophila melanogaster. Appel M, et al. PLoS One, 2015. PMID 25992709, Free PMC Article

    See all (28) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    mobile_element

    • Loc: 21265078-21265304 mobile_element_type = transposon:INE-1{}2222
    • Loc: 21265367-21266547 mobile_element_type = transposon:INE-1{}2223
    • Loc: 21267568-21267996 mobile_element_type = transposon:INE-1{}2224
    • Loc: 21270839-21272092 mobile_element_type = transposon:Cr1a{}1622
    • Loc: 21274847-21275147 mobile_element_type = transposon:INE-1{}5442

    Gene Ontology Provided by FlyBase

    Process Evidence Code Pubs
    involved_in dsRNA transport IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG8671-PA
    CG8671-PB
    CG8671-PC
    CG8671-PD
    CG8671-PE
    CG8671-PF
    CG8671-PG

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033779.5 Reference assembly

      Range
      21262956..21282790
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001299195.1 → NP_001286124.1  uncharacterized protein Dmel_CG8671, isoform G [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001286124.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VID5
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    2. NM_001273740.1 → NP_001260669.1  uncharacterized protein Dmel_CG8671, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260669.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDD2
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    3. NM_001273741.1 → NP_001260670.1  uncharacterized protein Dmel_CG8671, isoform E [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260670.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDX3
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    4. NM_001273742.1 → NP_001260671.1  uncharacterized protein Dmel_CG8671, isoform F [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001260671.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      M9PDK6
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    5. NM_165365.3 → NP_724324.2  uncharacterized protein Dmel_CG8671, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_724324.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q9VID5
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    6. NM_001144380.2 → NP_001137852.1  uncharacterized protein Dmel_CG8671, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001137852.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A2VEG3
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins

    7. NM_136259.3 → NP_610103.1  uncharacterized protein Dmel_CG8671, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_610103.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZ43
      Related
      FBpp0081013
      Conserved Domains (1) summary
      pfam10358
      Location:22 → 161
      NT-C2; N-terminal C2 in EEIG1 and EHBP1 proteins
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A2VEG3 A2VEG3
    M9PDD2 M9PDD2
    M9PDK6 M9PDK6
    M9PDX3 M9PDX3
    Q8SZ43 Q8SZ43
    Q9VID5 Q9VID5

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