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    LOC100250549 uncharacterized LOC100250549 [ Vitis vinifera (wine grape) ]

    Gene ID: 100250549, updated on 29-Sep-2023

    Summary

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    Gene symbol
    LOC100250549
    Gene description
    uncharacterized LOC100250549
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vitis vinifera
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; Vitales; Vitaceae; Viteae; Vitis
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    Genomic context

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    See LOC100250549 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ASM3070453v1 (GCF_030704535.1) 2 NC_081806.1 (8463241..8464538)
    102 previous assembly 12X (GCF_000003745.3) 2 NC_012008.3 (7005737..7007000)

    Chromosome 2 - NC_081806.1Genomic Context describing neighboring genes Neighboring gene aluminum-activated malate transporter 12 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene NAC domain-containing protein 71 Neighboring gene protein ABCI7, chloroplastic

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The high polyphenol content of grapevine cultivar tannat berries is conferred primarily by genes that are not shared with the reference genome. Da Silva C, et al. Plant Cell, 2013 Dec. PMID 24319081, Free PMC Article
    2. The grapevine genome sequence suggests ancestral hexaploidization in major angiosperm phyla. Jaillon O, et al. Nature, 2007 Sep 27. PMID 17721507

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100250549

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_030704535.1-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM3070453v1 Primary Assembly

    Genomic

    1. NC_081806.1 Reference ASM3070453v1 Primary Assembly

      Range
      8463241..8464538
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002278539.4 → XP_002278575.1  uncharacterized protein LOC100250549

      UniProtKB/TrEMBL
      A0A438JZN0
      Conserved Domains (1) summary
      cl02144
      Location:64 → 158
      TLD; TLD
    Nucleotide Protein
    Heading Accession and Version

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