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    MICPUCDRAFT_50662 vacuolar transport chaperone protein [ Micromonas pusilla CCMP1545 ]

    Gene ID: 9680210, updated on 6-Jan-2024

    Summary

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    Gene symbol
    MICPUCDRAFT_50662
    Gene description
    vacuolar transport chaperone protein
    Locus tag
    MICPUCDRAFT_50662
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Micromonas pusilla CCMP1545 (strain: CCMP1545)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; Mamiellophyceae; Mamiellales; Mamiellaceae; Micromonas
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    Genomic context

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    See MICPUCDRAFT_50662 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    2

    NW_003315882.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene COMPASS/Set1C complex protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_003315882.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Green evolution and dynamic adaptations revealed by genomes of the marine picoeukaryotes Micromonas. Worden AZ, et al. Science, 2009 Apr 10. PMID 19359590

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    vacuolar transport chaperone protein
    XP_003055174.1
    • Has three domain motifs: SPX domain. We have named this region the SPX domain after (SYG1, Pho81 and XPR1). This 180 residue length domain is found at the amino terminus of a variety of proteins

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_003315882.1 Reference assembly

      Range
      1698155..1701080
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003055128.1 → XP_003055174.1  vacuolar transport chaperone protein [Micromonas pusilla CCMP1545]

      See identical proteins and their annotated locations for XP_003055174.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C1MIQ9
      Conserved Domains (4) summary
      cd07751
      Location:288 → 603
      PolyPPase_VTC4_like; Polyphosphate(polyP) polymerase domain of yeast vacuolar transport chaperone (VTC) protein VTC4, and similar proteins
      COG5036
      Location:1 → 606
      COG5036; SPX domain-containing protein involved in vacuolar polyphosphate accumulation [Inorganic ion transport and metabolism, Intracellular trafficking, secretion, and vesicular transport]
      COG5264
      Location:743 → 863
      VTC1; Vacuolar transporter chaperone [Posttranslational modification, protein turnover, chaperones]
      cd14447
      Location:2 → 228
      SPX; Domain found in Syg1, Pho81, XPR1, and related proteins
    Nucleotide Protein
    Heading Accession and Version

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