U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    tms1 hexitol dehydrogenase [ Schizosaccharomyces pombe (fission yeast) ]

    Gene ID: 2540119, updated on 18-Sep-2024

    Summary

    Official Symbol
    tms1
    Official Full Name
    hexitol dehydrogenase
    Primary source
    PomBase:SPBC1773.05c
    Locus tag
    SPOM_SPBC1773.05C
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Schizosaccharomyces pombe (strain: 972h-)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
    Also known as
    xdh1
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See tms1 in Genome Data Viewer
    Location:
    chromosome: II
    Exon count:
    1
    Sequence:
    Chromosome: II; NC_003423.3 (290730..291958, complement)

    Chromosome II - NC_003423.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene methylglyoxyl reductase (NADPH-dependent) Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene alcohol dehydrogenase

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by PomBase

    Function Evidence Code Pubs
    enables D-xylulose reductase activity IDA
    Inferred from Direct Assay
    more info
    PubMed 
    enables L-iditol 2-dehydrogenase (NAD+) activity IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
     
    Process Evidence Code Pubs
    involved_in sorbitol catabolic process IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    Component Evidence Code Pubs
    is_active_in cytosol HDA PubMed 

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003423.3 Reference assembly

      Range
      290730..291958 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001021027.3NP_595120.1  hexitol dehydrogenase [Schizosaccharomyces pombe]

      See identical proteins and their annotated locations for NP_595120.1

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      P36624
      Conserved Domains (1) summary
      cd05285
      Location:7355
      sorbitol_DH; Sorbitol dehydrogenase