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    OT_ostta03g03240 Ribosomal protein S2, eukaryotic/archaeal [ Ostreococcus tauri ]

    Gene ID: 9833098, updated on 16-Nov-2023

    Summary

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    Gene symbol
    OT_ostta03g03240
    Gene description
    Ribosomal protein S2, eukaryotic/archaeal
    Locus tag
    OT_ostta03g03240
    Gene type
    protein coding
    RNA name
    Ribosomal protein S2, eukaryotic/archaeal
    RefSeq status
    PROVISIONAL
    Organism
    Ostreococcus tauri (strain: RCC4221)
    Lineage
    Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
    Old locus tag
    Ot03g03270
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    Genomic context

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    See OT_ostta03g03240 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    1
    Sequence:
    Chromosome: 3; NC_014428.2 (539325..540188)

    Chromosome 3 - NC_014428.2Genomic Context describing neighboring genes Neighboring gene unnamed product Neighboring gene unnamed product Neighboring gene Sybindin-like protein Neighboring gene Phosphoserine aminotransferase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_014428.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
    2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in ribosomal small subunit assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of 90S preribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of cytosolic small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    Ribosomal protein S2, eukaryotic/archaeal

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_014428.2 Reference assembly

      Range
      539325..540188
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003078190.2 → XP_003078238.2  Ribosomal protein S2, eukaryotic/archaeal [Ostreococcus tauri]

      Status: PROVISIONAL

      UniProtKB/Swiss-Prot
      A0A090M3C2, Q01CH5
      UniProtKB/TrEMBL
      A0A1Y5I389
      Conserved Domains (1) summary
      cl00315
      Location:1 → 204
      RPS2; Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q01CH5.2

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