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    LOC126900123 synaptosomal-associated protein 25 [ Daktulosphaira vitifoliae (grape phylloxera) ]

    Gene ID: 126900123, updated on 10-May-2024

    Summary

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    Gene symbol
    LOC126900123
    Gene description
    synaptosomal-associated protein 25
    See related
    EnsemblRapid:LOC126900123
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Daktulosphaira vitifoliae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Hemiptera; Sternorrhyncha; Aphidomorpha; Phylloxeroidea; Phylloxeridae; Daktulosphaira
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC126900123 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    100 current ASM2509136v1 (GCF_025091365.1) Unplaced Scaffold NW_026099573.1 (21393064..21409600, complement)

    NW_026099573.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC126899507 Neighboring gene zinc finger MYM-type protein 1-like Neighboring gene uncharacterized LOC126899508 Neighboring gene putative mediator of RNA polymerase II transcription subunit 24 Neighboring gene prohormone processing protease amontillado Neighboring gene transcription factor kayak

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026099573 Unplaced Scaffold Reference ASM2509136v1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables syntaxin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle fusion to presynaptic active zone membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in synaptic vesicle priming IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptosomal-associated protein 25

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Daktulosphaira vitifoliae Annotation Release 100 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM2509136v1

    Genomic

    1. NW_026099573.1 Reference ASM2509136v1

      Range
      21393064..21409600 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_050675618.1 → XP_050531575.1  synaptosomal-associated protein 25 isoform X2

      Related
      XP_050531575.1, XM_050675618.1

    2. XM_050675619.1 → XP_050531576.1  synaptosomal-associated protein 25 isoform X3

      Related
      XP_050531576.1, XM_050675619.1

    3. XM_050675617.1 → XP_050531574.1  synaptosomal-associated protein 25 isoform X1

      Related
      XP_050531574.1, XM_050675617.1

    4. XM_050675622.1 → XP_050531579.1  synaptosomal-associated protein 25 isoform X3

      Related
      XP_050531579.1, XM_050675622.1

    5. XM_050675621.1 → XP_050531578.1  synaptosomal-associated protein 25 isoform X3

      Related
      XP_050531578.1, XM_050675621.1

    6. XM_050675620.1 → XP_050531577.1  synaptosomal-associated protein 25 isoform X3

      Related
      XP_050531577.1, XM_050675620.1
    Nucleotide Protein
    Heading Accession and Version

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