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    PAS_chr2-1_0429 One of two nearly identical (see also HTA1) histone H2A subtypes [ Komagataella phaffii GS115 ]

    Gene ID: 8198897, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_chr2-1_0429
    Gene description
    One of two nearly identical (see also HTA1) histone H2A subtypes
    Locus tag
    PAS_chr2-1_0429
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_chr2-1_0429 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    1
    Sequence:
    Chromosome: 2; NC_012964.1 (787331..787723)

    Chromosome 2 - NC_012964.1Genomic Context describing neighboring genes Neighboring gene Putative high affinity iron transporter involved in transport of intravacuolar stores of iron Neighboring gene One of two nearly identical (see HTB1) histone H2B subtypes Neighboring gene Essential subunit of the COMPASS (Set1C) complex Neighboring gene Short-lived chaperone required for correct maturation of the 20S proteasome

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012964.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein heterodimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of nucleosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    One of two nearly identical (see also HTA1) histone H2A subtypes

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012964.1 Reference assembly

      Range
      787331..787723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002491287.1 → XP_002491332.1  One of two nearly identical (see also HTA1) histone H2A subtypes [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002491332.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1G4KPZ2, C4R0M8
      Conserved Domains (1) summary
      PTZ00017
      Location:2 → 127
      PTZ00017; histone H2A; Provisional
    Nucleotide Protein
    Heading Accession and Version

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