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    N7479_011099 RRNA biogenesis protein RRP5 [ Penicillium vulpinum ]

    Gene ID: 81910570, updated on 31-Oct-2024

    Summary

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    Gene symbol
    N7479_011099
    Gene description
    RRNA biogenesis protein RRP5
    Locus tag
    N7479_011099
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Penicillium vulpinum (strain: IBT 29486, culture-collection: IBT:29486)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Eurotiales; Aspergillaceae; Penicillium
    Orthologs
    Aspergillus fumigatus all
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    Genomic context

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    See N7479_011099 in Genome Data Viewer
    Location:
    chromosome: Unknown
    Exon count:
    3

    NW_026643244.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene Urease accessory protein UreD

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026643244.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomic study of the Penicillium genus elucidates a diverse pangenome and 15 lateral gene transfer events. Petersen C, et al. IMA Fungus, 2023 Feb 1. PMID 36726175, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in rRNA processing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of small-subunit processome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RRNA biogenesis protein RRP5
    XP_057106248.1
    • S1 RNA binding domain

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NW_026643244.1 Reference assembly

      Range
      6813694..6819210
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_057258790.1 → XP_057106248.1  RRNA biogenesis protein RRP5 [Penicillium vulpinum]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1V6RSX8
    Nucleotide Protein
    Heading Accession and Version

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