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    CG31109 uncharacterized protein [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 43001, updated on 9-Dec-2024

    Summary

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    Official Symbol
    CG31109provided by FlyBase
    Official Full Name
    uncharacterized proteinprovided by FlyBase
    Primary source
    FLYBASE:FBgn0051109
    Locus tag
    Dmel_CG31109
    See related
    AllianceGenome:FB:FBgn0051109
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    BcDNA:RE17222; CG13649; Dmel\CG31109
    Summary
    Predicted to enable zinc ion binding activity. Predicted to be located in nucleus. Is expressed in nurse cell; oocyte; and organism. [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
    all
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    Genomic context

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    See CG31109 in Genome Data Viewer
    Location:
    96B19-96B19; 3-86 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3R NT_033777.3 (25053369..25054653, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3R NT_033777.2 (20879091..20880375, complement)

    Chromosome 3R - NT_033777.3Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene staccato

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Lineage-specific expansion of the zinc finger associated domain ZAD. Chung HR, et al. Mol Biol Evol, 2007 Sep. PMID 17569752
    2. An RNA-interference screen in Drosophila to identify ZAD-containing C2H2 zinc finger genes that function in female germ cells. Shapiro-Kulnane L, et al. G3 (Bethesda), 2021 Jan 18. PMID 33561227, Free PMC Article
    3. Genome-Wide Mapping Targets of the Metazoan Chromatin Remodeling Factor NURF Reveals Nucleosome Remodeling at Enhancers, Core Promoters and Gene Insulators. Kwon SY, et al. PLoS Genet, 2016 Apr. PMID 27046080, Free PMC Article
    4. Innovation of heterochromatin functions drives rapid evolution of essential ZAD-ZNF genes in Drosophila. Kasinathan B, et al. Elife, 2020 Nov 10. PMID 33169670, Free PMC Article
    5. Phylostratigraphic bias creates spurious patterns of genome evolution. Moyers BA, et al. Mol Biol Evol, 2015 Jan. PMID 25312911, Free PMC Article

    See all (22) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by FlyBase

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    Names
    CG31109-PA
    CG31109-PB

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_033777.3 Reference assembly

      Range
      25053369..25054653 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001276017.1 → NP_001262946.1  uncharacterized protein Dmel_CG31109, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001262946.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZ45, Q9VBY9
      Conserved Domains (1) summary
      smart00868
      Location:13 → 76
      zf-AD; Zinc-finger associated domain (zf-AD)

    2. NM_170194.3 → NP_733073.1  uncharacterized protein Dmel_CG31109, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_733073.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      Q8SZ45, Q9VBY9
      Related
      FBpp0084166
      Conserved Domains (1) summary
      smart00868
      Location:13 → 76
      zf-AD; Zinc-finger associated domain (zf-AD)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9VBY9 Q9VBY9

    Gene LinkOut

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