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    CycT Cyclin T [ Drosophila melanogaster (fruit fly) ]

    Gene ID: 39961, updated on 9-Dec-2024

    Summary

    Official Symbol
    CycTprovided by FlyBase
    Official Full Name
    Cyclin Tprovided by FlyBase
    Primary source
    FLYBASE:FBgn0025455
    Locus tag
    Dmel_CG6292
    See related
    AllianceGenome:FB:FBgn0025455
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Drosophila melanogaster
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
    Also known as
    anon-74EFc; CG6292; Dmcyclin T; Dmel\CG6292; dT; ORE-14; P-TEFb; p124
    Summary
    Enables cyclin-dependent protein serine/threonine kinase regulator activity. Involved in DNA-templated transcription; positive regulation of transcription elongation by RNA polymerase II; and response to heat. Located in nucleus and polytene chromosome puff. Part of P-TEFb complex and super elongation complex. Is expressed in anterior endoderm anlage; dorsal ectoderm anlage; organism; and ventral ectoderm anlage. Orthologous to human CCNT1 (cyclin T1) and CCNT2 (cyclin T2). [provided by Alliance of Genome Resources, Dec 2024]
    Orthologs
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    Genomic context

    See CycT in Genome Data Viewer
    Location:
    74D4-74D4; 3-45 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    Release 6.54 current Release 6 plus ISO1 MT (GCF_000001215.4) 3L NT_037436.4 (17551004..17557788, complement)
    Release 5.57 previous assembly Release 5 (GCF_000001215.2) 3L NT_037436.3 (17544104..17550888, complement)

    Chromosome 3L - NT_037436.4Genomic Context describing neighboring genes Neighboring gene Jonah 74E Neighboring gene uncharacterized protein Neighboring gene Ecdysone-induced protein 74EF Neighboring gene Vacuolar protein sorting 60

    Genomic regions, transcripts, and products

    Bibliography

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Gene Ontology Provided by FlyBase

    Component Evidence Code Pubs
    part_of P-TEFb complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of cyclin/CDK positive transcription elongation factor complex IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    part_of cyclin/CDK positive transcription elongation factor complex TAS
    Traceable Author Statement
    more info
    PubMed 
    is_active_in nucleus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in polytene chromosome puff IDA
    Inferred from Direct Assay
    more info
    PubMed 
    part_of super elongation complex IPI
    Inferred from Physical Interaction
    more info
    PubMed 
    part_of transcription elongation factor complex IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    cyclin T
    Names
    CG6292-PA
    CG6292-PB
    CG6292-PC
    CG6292-PD
    CycT-PA
    CycT-PB
    CycT-PC
    CycT-PD
    CyclinT
    cyclin T1
    cyclin T2
    dCyclin T
    dmCyclin T

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NT_037436.4 Reference assembly

      Range
      17551004..17557788 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001275063.2NP_001261992.1  cyclin T, isoform C [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261992.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O96433, Q9VVI6
      UniProtKB/TrEMBL
      B9EQP8, M9PFT9
      Conserved Domains (2) summary
      smart00385
      Location:203251
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
      pfam00134
      Location:42176
      Cyclin_N; Cyclin, N-terminal domain
    2. NM_001275064.2NP_001261993.1  cyclin T, isoform D [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_001261993.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9EQP8, M9PI89
    3. NM_079403.4NP_524127.2  cyclin T, isoform B [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_524127.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O96433, Q9VVI6
      UniProtKB/TrEMBL
      B9EQP8, M9PFT9
      Related
      FBpp0074968
      Conserved Domains (2) summary
      smart00385
      Location:203251
      CYCLIN; domain present in cyclins, TFIIB and Retinoblastoma
      pfam00134
      Location:42176
      Cyclin_N; Cyclin, N-terminal domain
    4. NM_206395.3NP_996117.1  cyclin T, isoform A [Drosophila melanogaster]

      See identical proteins and their annotated locations for NP_996117.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      B9EQP8, M9PI89