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    Cmas cytidine monophospho-N-acetylneuraminic acid synthetase [ Mus musculus (house mouse) ]

    Gene ID: 12764, updated on 27-Nov-2024

    Summary

    Official Symbol
    Cmasprovided by MGI
    Official Full Name
    cytidine monophospho-N-acetylneuraminic acid synthetaseprovided by MGI
    Primary source
    MGI:MGI:1337124
    See related
    Ensembl:ENSMUSG00000030282 AllianceGenome:MGI:1337124
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    CMPNeu5Ac; D6Bwg0250e
    Summary
    Enables N-acylneuraminate cytidylyltransferase activity. Involved in CMP-N-acetylneuraminate biosynthetic process. Is active in nucleoplasm. Is expressed in several structures, including alimentary system; genitourinary system; liver; nervous system; and sensory organ. Used to study focal segmental glomerulosclerosis. Orthologous to human CMAS (cytidine monophosphate N-acetylneuraminic acid synthetase). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in liver E14 (RPKM 52.8), liver E14.5 (RPKM 43.2) and 28 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Cmas in Genome Data Viewer
    Location:
    6 G2; 6 74.66 cM
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (142702468..142721440)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (142756686..142775714)

    Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_17709 Neighboring gene potassium inwardly-rectifying channel, subfamily J, member 8 Neighboring gene RIKEN cDNA 5330439B14 gene Neighboring gene ATP-binding cassette, sub-family C member 9 Neighboring gene STARR-seq mESC enhancer starr_17710 Neighboring gene STARR-positive B cell enhancer ABC_E10416 Neighboring gene predicted gene, 53249 Neighboring gene predicted gene, 46981 Neighboring gene sulfotransferase family 6B, member 2 Neighboring gene predicted gene 7457 Neighboring gene ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (2) 
    • Targeted (2)  1 citation

    Pathways from PubChem

    Interactions

    Products Interactant Other Gene Complex Source Pubs Description

    General protein information

    Preferred Names
    N-acylneuraminate cytidylyltransferase
    Names
    CMP-N-acetylneuraminic acid synthase
    CMP-N-acetylneuraminic acid synthetase
    CMP-Neu5Ac synthase
    CMP-NeuNAc synthase
    CMP-NeuNAc synthetase
    CMP-sialic acid synthetase
    NP_001396504.1
    NP_001396505.1
    NP_034038.2

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001409575.1NP_001396504.1  N-acylneuraminate cytidylyltransferase isoform 2

      Status: VALIDATED

      Source sequence(s)
      AC164104
    2. NM_001409576.1NP_001396505.1  N-acylneuraminate cytidylyltransferase isoform 3

      Status: VALIDATED

      Source sequence(s)
      AC164104
    3. NM_009908.3NP_034038.2  N-acylneuraminate cytidylyltransferase isoform 1

      See identical proteins and their annotated locations for NP_034038.2

      Status: VALIDATED

      Source sequence(s)
      AC164104
      Consensus CDS
      CCDS20687.1
      UniProtKB/Swiss-Prot
      O88719, Q8C330, Q8K2G7, Q99KK2
      UniProtKB/TrEMBL
      A0A0R4J0B4
      Related
      ENSMUSP00000032419.9, ENSMUST00000032419.9
      Conserved Domains (2) summary
      cd02513
      Location:42257
      CMP-NeuAc_Synthase; CMP-NeuAc_Synthase activates N-acetylneuraminic acid by adding CMP moiety
      cl21460
      Location:268419
      HAD_like; Haloacid Dehalogenase-like Hydrolases

    RNA

    1. NR_176869.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164104
    2. NR_176870.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164104
    3. NR_176871.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC164104

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000072.7 Reference GRCm39 C57BL/6J

      Range
      142702468..142721440
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)