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    LRFN5 leucine rich repeat and fibronectin type III domain containing 5 [ Monodelphis domestica (gray short-tailed opossum) ]

    Gene ID: 100010752, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LRFN5
    Gene description
    leucine rich repeat and fibronectin type III domain containing 5
    See related
    EnsemblRapid:ENSMODG00000013085
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Monodelphis domestica
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Didelphimorphia; Didelphidae; Monodelphis
    Orthologs
    human mouse all
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    Genomic context

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    See LRFN5 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_05 current mMonDom1.pri (GCF_027887165.1) 1 NC_077227.1 (294626401..294963260, complement)
    103 previous assembly MonDom5 (GCF_000002295.2) 1 NC_008801.1 (282143707..282475911)

    Chromosome 1 - NC_077227.1Genomic Context describing neighboring genes Neighboring gene MAM domain containing glycosylphosphatidylinositol anchor 2 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase-like Neighboring gene importin subunit alpha-6-like Neighboring gene uncharacterized LOC107649870 Neighboring gene atlastin GTPase 1 Neighboring gene salvador family WW domain containing protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    leucine-rich repeat and fibronectin type-III domain-containing protein 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_027887165.1-RS_2023_05

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mMonDom1.pri

    Genomic

    1. NC_077227.1 Reference mMonDom1.pri

      Range
      294626401..294963260 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_056821065.1 → XP_056677043.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    2. XM_056821061.1 → XP_056677039.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372
      Related
      ENSMODP00000043113.1, ENSMODT00000076696.2

    3. XM_056821060.1 → XP_056677038.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    4. XM_056821058.1 → XP_056677036.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    5. XM_056821045.1 → XP_056677023.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    6. XM_056821053.1 → XP_056677031.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372
      Related
      ENSMODP00000016376.4, ENSMODT00000016678.4

    7. XM_056821050.1 → XP_056677028.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    8. XM_056821037.1 → XP_056677015.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    9. XM_056821041.1 → XP_056677019.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    10. XM_056821039.1 → XP_056677017.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    11. XM_056821034.1 → XP_056677012.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    12. XM_056821047.1 → XP_056677025.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X3

      UniProtKB/TrEMBL
      A0A5F8G6M1, K7E372

    13. XM_056821030.1 → XP_056677008.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      K7E372

    14. XM_056821023.1 → XP_056677001.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      K7E372

    15. XM_056821018.1 → XP_056676996.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X2

      UniProtKB/TrEMBL
      K7E372
      Related
      ENSMODP00000040223.2, ENSMODT00000043326.3

    16. XM_056821012.1 → XP_056676990.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    17. XM_056821009.1 → XP_056676987.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    18. XM_056820962.1 → XP_056676940.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    19. XM_056821000.1 → XP_056676978.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    20. XM_056821017.1 → XP_056676995.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    21. XM_056820995.1 → XP_056676973.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    22. XM_056820985.1 → XP_056676963.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    23. XM_056820987.1 → XP_056676965.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    24. XM_016428048.2 → XP_016283534.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372
      Conserved Domains (8) summary
      cd05764
      Location:301 → 374
      Ig_2; Subgroup of the immunoglobulin (Ig) superfamily
      cd00116
      Location:51 → 159
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam07679
      Location:287 → 374
      I-set; Immunoglobulin I-set domain
      sd00033
      Location:53 → 76
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00041
      Location:422 → 495
      fn3; Fibronectin type III domain
      pfam12799
      Location:149 → 187
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:99 → 159
      LRR_8; Leucine rich repeat
      cl15307
      Location:240 → 272
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

    25. XM_016428046.2 → XP_016283532.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372
      Conserved Domains (8) summary
      cd05764
      Location:301 → 374
      Ig_2; Subgroup of the immunoglobulin (Ig) superfamily
      cd00116
      Location:51 → 159
      LRR_RI; Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond ...
      pfam07679
      Location:287 → 374
      I-set; Immunoglobulin I-set domain
      sd00033
      Location:53 → 76
      LRR_RI; leucine-rich repeat [structural motif]
      pfam00041
      Location:422 → 495
      fn3; Fibronectin type III domain
      pfam12799
      Location:149 → 187
      LRR_4; Leucine Rich repeats (2 copies)
      pfam13855
      Location:99 → 159
      LRR_8; Leucine rich repeat
      cl15307
      Location:240 → 272
      TPKR_C2; Tyrosine-protein kinase receptor C2 Ig-like domain

    26. XM_056820981.1 → XP_056676959.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    27. XM_056820950.1 → XP_056676928.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    28. XM_056820989.1 → XP_056676967.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372
      Related
      ENSMODP00000062553.1, ENSMODT00000127779.1

    29. XM_056820991.1 → XP_056676969.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    30. XM_056820969.1 → XP_056676947.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    31. XM_056820945.1 → XP_056676923.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372

    32. XM_056820956.1 → XP_056676934.1  leucine-rich repeat and fibronectin type-III domain-containing protein 5 isoform X1

      UniProtKB/TrEMBL
      K7E372
    Nucleotide Protein
    Heading Accession and Version

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