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    PAS_FragB_0044 Transcriptional coactivator HFI1/ADA1 [ Komagataella phaffii GS115 ]

    Gene ID: 8197486, updated on 23-Nov-2023

    Summary

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    Gene symbol
    PAS_FragB_0044
    Gene description
    Transcriptional coactivator HFI1/ADA1
    Locus tag
    PAS_FragB_0044
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Komagataella phaffii GS115 (strain: GS115)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Phaffomycetaceae; Komagataella
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    Genomic context

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    See PAS_FragB_0044 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_012963.1 (2740290..2741636, complement)

    Chromosome 1 - NC_012963.1Genomic Context describing neighboring genes Neighboring gene Adrenodoxin homolog, mitochondrial Neighboring gene Hypothetical protein Neighboring gene Hypothetical protein Neighboring gene G1/S-specific cyclin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012963.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome sequence of the recombinant protein production host Pichia pastoris. De Schutter K, et al. Nat Biotechnol, 2009 Jun. PMID 19465926
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transcription coactivator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SAGA complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Transcriptional coactivator HFI1/ADA1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012963.1 Reference assembly

      Range
      2740290..2741636 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002490812.1 → XP_002490857.1  Transcriptional coactivator HFI1/ADA1 [Komagataella phaffii GS115]

      See identical proteins and their annotated locations for XP_002490857.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      C4QZA3, F2QQG2
      Conserved Domains (1) summary
      pfam12767
      Location:62 → 290
      SAGA-Tad1; Transcriptional regulator of RNA polII, SAGA, subunit
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    6TB4_A.1
    6TBM_A.1

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