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    ZYRO0D06028g cleavage polyadenylation factor subunit CFT2 [ Zygosaccharomyces rouxii ]

    Gene ID: 8203949, updated on 4-Dec-2024

    Summary

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    Gene symbol
    ZYRO0D06028g
    Gene description
    cleavage polyadenylation factor subunit CFT2
    Locus tag
    ZYRO0D06028g
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Zygosaccharomyces rouxii (strain: CBS 732, type-material: culture from type material of Saccharomyces rouxii)
    Lineage
    Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Zygosaccharomyces
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    Genomic context

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    See ZYRO0D06028g in Genome Data Viewer
    Location:
    chromosome: D
    Exon count:
    1
    Sequence:
    Chromosome: D; NC_012993.1 (511205..513712, complement)

    Chromosome D - NC_012993.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene mRNA splicing protein MSL5 Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012993.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Comparative genomics of protoploid Saccharomycetaceae. Génolevures Consortium, et al. Genome Res, 2009 Oct. PMID 19525356, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA 3'-end processing by stem-loop binding and cleavage IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mRNA cleavage and polyadenylation specificity factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    cleavage polyadenylation factor subunit CFT2
    XP_002496697.1
    • similar to uniprot|Q12102 Saccharomyces cerevisiae YLR115W

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012993.1 Reference assembly

      Range
      511205..513712 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002496652.1 → XP_002496697.1  cleavage polyadenylation factor subunit CFT2 [Zygosaccharomyces rouxii]

      See identical proteins and their annotated locations for XP_002496697.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A1Q2ZZF9, A0A1Q3ADK0, C5DVE5
      Conserved Domains (3) summary
      smart01027
      Location:254 → 369
      Beta-Casp; Beta-Casp domain
      pfam13299
      Location:701 → 832
      CPSF100_C; Cleavage and polyadenylation factor 2 C-terminal
      pfam16661
      Location:19 → 211
      Lactamase_B_6; Metallo-beta-lactamase superfamily domain
    Nucleotide Protein
    Heading Accession and Version

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