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    SNX19 sorting nexin 19 [ Hylobates moloch (silvery gibbon) ]

    Gene ID: 116477174, updated on 18-Mar-2024

    Summary

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    Gene symbol
    SNX19
    Gene description
    sorting nexin 19
    See related
    EnsemblRapid:ENSHMOG00010014347
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Hylobates moloch
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Hylobates
    Orthologs
    human mouse all
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    Genomic context

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    See SNX19 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    20
    Annotation release Status Assembly Chr Location
    RS_2023_07 current HMol_V3 (GCF_009828535.3) Unplaced Scaffold NW_026652286.1 (103565144..103638009, complement)
    100 previous assembly HMol (GCF_009828535.1) Unplaced Scaffold NW_022454855.1 (103565714..103638039, complement)

    NW_026652286.1Genomic Context describing neighboring genes Neighboring gene bcl-2 homologous antagonist/killer-like Neighboring gene uncharacterized protein C11orf44-like Neighboring gene uncharacterized LOC131384649 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene neurotrimin

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphatidylinositol binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in early endosome membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sorting nexin-19

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009828535.3-RS_2023_07

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference HMol_V3

    Genomic

    1. NW_026652286.1 Reference HMol_V3

      Range
      103565144..103638009 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058446201.1 → XP_058302184.1  sorting nexin-19 isoform X1

    2. XM_058446202.1 → XP_058302185.1  sorting nexin-19 isoform X1

      Related
      ENSHMOP00010016814.1, ENSHMOT00010021595.1

    3. XM_032167910.2 → XP_032023801.1  sorting nexin-19 isoform X4

      Conserved Domains (2) summary
      pfam08628
      Location:269 → 370
      Nexin_C; Sorting nexin C terminal
      cl02563
      Location:27 → 84
      PX_domain; The Phox Homology domain, a phosphoinositide binding module

    4. XM_032167908.2 → XP_032023799.1  sorting nexin-19 isoform X2

      Conserved Domains (3) summary
      cd06893
      Location:532 → 659
      PX_SNX19; The phosphoinositide binding Phox Homology domain of Sorting Nexin 19
      smart00313
      Location:95 → 272
      PXA; Domain associated with PX domains
      PRK10263
      Location:270 → 332
      PRK10263; DNA translocase FtsK; Provisional

    5. XM_032167909.2 → XP_032023800.1  sorting nexin-19 isoform X3

      Related
      ENSHMOP00010016790.1, ENSHMOT00010021568.1
      Conserved Domains (3) summary
      cd06893
      Location:532 → 659
      PX_SNX19; The phosphoinositide binding Phox Homology domain of Sorting Nexin 19
      smart00313
      Location:95 → 272
      PXA; Domain associated with PX domains
      PRK10263
      Location:270 → 332
      PRK10263; DNA translocase FtsK; Provisional

    RNA

    1. XR_009215475.1 RNA Sequence

    2. XR_009215467.1 RNA Sequence

    3. XR_009215470.1 RNA Sequence

    4. XR_009215469.1 RNA Sequence

    5. XR_009215471.1 RNA Sequence

    6. XR_009215472.1 RNA Sequence

    7. XR_009215468.1 RNA Sequence

    8. XR_009215474.1 RNA Sequence

    9. XR_004250383.2 RNA Sequence

    10. XR_004250385.2 RNA Sequence

    11. XR_009215473.1 RNA Sequence

    12. XR_004250384.2 RNA Sequence

    13. XR_009215476.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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