U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC131593608 disease resistance protein RPM1-like [ Vicia villosa (hairy vetch) ]

    Gene ID: 131593608, updated on 23-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC131593608
    Gene description
    disease resistance protein RPM1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Vicia villosa
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade; NPAAA clade; Hologalegina; IRL clade; Fabeae; Vicia
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC131593608 in Genome Data Viewer
    Location:
    chromosome: LG3
    Exon count:
    2
    Annotation release Status Assembly LG Location
    RS_2023_08 current Vvil1.0 (GCF_029867415.1) LG3 NC_081182.1 (218414847..218418466)

    Linkage Group LG3 - NC_081182.1Genomic Context describing neighboring genes Neighboring gene WAT1-related protein At5g07050-like Neighboring gene small nucleolar RNA R71 Neighboring gene uncharacterized LOC131659969 Neighboring gene uncharacterized LOC131659970 Neighboring gene uncharacterized LOC131657425

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_081182.1 Chromosome LG3 Reference Vvil1.0

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ADP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in defense response to other organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    disease resistance protein RPM1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_029867415.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Vvil1.0

    Genomic

    1. NC_081182.1 Reference Vvil1.0

      Range
      218414847..218418466
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_058866176.1 → XP_058722159.1  disease resistance protein RPM1-like

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases