U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from Protein

    • Showing Current items.

    LOC117405462 roundabout homolog 1-like [ Acipenser ruthenus (sterlet) ]

    Gene ID: 117405462, updated on 26-Oct-2023

    Summary

    Go to the top of the page Help
    Gene symbol
    LOC117405462
    Gene description
    roundabout homolog 1-like
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Acipenser ruthenus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See LOC117405462 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 9 NC_081197.1 (18763702..19204050, complement)
    101 previous assembly ASM1064508v1 (GCF_010645085.1) 8 NC_048330.1 (18463990..18513141)

    Chromosome 9 - NC_081197.1Genomic Context describing neighboring genes Neighboring gene roundabout homolog 2 Neighboring gene uncharacterized LOC131737986 Neighboring gene uncharacterized LOC131738011 Neighboring gene 1,4-alpha-glucan-branching enzyme-like Neighboring gene uncharacterized LOC131737890

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables axon guidance receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in Roundabout signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in axon guidance IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in axon midline choice point recognition IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    roundabout homolog 1-like

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference fAciRut3.2 maternal haplotype Primary Assembly

    Genomic

    1. NC_081197.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

      Range
      18763702..19204050 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059031316.1 → XP_058887299.1  roundabout homolog 1-like isoform X4

    2. XM_059031315.1 → XP_058887298.1  roundabout homolog 1-like isoform X3

    3. XM_059031313.1 → XP_058887296.1  roundabout homolog 1-like isoform X1

    4. XM_059031314.1 → XP_058887297.1  roundabout homolog 1-like isoform X2

    5. XM_059031317.1 → XP_058887300.1  roundabout homolog 1-like isoform X5

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases