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    PF3D7_1114100.1 rhomboid protease ROM1 [ Plasmodium falciparum 3D7 ]

    Gene ID: 810696, updated on 12-Sep-2024

    Summary

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    Gene symbol
    PF3D7_1114100.1
    Gene description
    rhomboid protease ROM1
    Locus tag
    PF3D7_1114100.1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Plasmodium falciparum 3D7 (isolate: 3D7)
    Lineage
    Eukaryota; Sar; Alveolata; Apicomplexa; Aconoidasida; Haemosporida; Plasmodiidae; Plasmodium; Plasmodium (Laverania)
    Old locus tag
    PF3D7_1114100.2
    Orthologs
    all
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    Genomic context

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    See PF3D7_1114100.1 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Sequence:
    Chromosome: 11; NC_037282.1 (539903..541387)

    Chromosome 11 - NC_037282.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase 2 Neighboring gene dynein light chain Tctex-type, putative Neighboring gene GTPase-activating protein, putative Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037282.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Intramembrane proteolysis mediates shedding of a key adhesin during erythrocyte invasion by the malaria parasite. O'Donnell RA, et al. J Cell Biol, 2006 Sep 25. PMID 17000879, Free PMC Article
    2. Two Plasmodium rhomboid proteases preferentially cleave different adhesins implicated in all invasive stages of malaria. Baker RP, et al. PLoS Pathog, 2006 Oct. PMID 17040128, Free PMC Article
    3. Genome sequence of the human malaria parasite Plasmodium falciparum. Gardner MJ, et al. Nature, 2002 Oct 3. PMID 12368864, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by GeneDB

    Function Evidence Code Pubs
    enables peptidase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within signal peptide processing IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microneme IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    rhomboid protease ROM1
    XP_001347820.2
    XP_024329119.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_037282.1 Reference assembly

      Range
      539903..541387
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001347784.2 → XP_001347820.2  rhomboid protease ROM1 [Plasmodium falciparum 3D7]

      See identical proteins and their annotated locations for XP_001347820.2

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A024UZ77, A0A024WPN0, A0A024X7B8, A8IWX2, Q8IIM2, W4IEP8, W4ITU0, W7FA32, W7FXB3, W7JTY8
      Conserved Domains (1) summary
      PTZ00101
      Location:1 → 278
      PTZ00101; rhomboid-1 protease; Provisional

    2. XM_024473312.1 → XP_024329119.1  rhomboid protease ROM1 [Plasmodium falciparum 3D7]

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A143ZYK6, A0A2I0C165, W7FA32
      Conserved Domains (1) summary
      PTZ00101
      Location:1 → 276
      PTZ00101; rhomboid-1 protease; Provisional
    Nucleotide Protein
    Heading Accession and Version

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