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    FOXP1 forkhead box P1 [ Bos taurus (domestic cattle) ]

    Gene ID: 515903, updated on 30-Jan-2025

    Summary

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    Official Symbol
    FOXP1provided by VGNC
    Official Full Name
    forkhead box P1provided by VGNC
    Primary source
    VGNC:VGNC:29101
    See related
    BGD:BT11551; EnsemblRapid:ENSBTAG00070020145
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
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    Genomic context

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    See FOXP1 in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    37
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (30062278..30690217)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132343536 Neighboring gene prokineticin 2 Neighboring gene G protein-coupled receptor 27 Neighboring gene eukaryotic translation initiation factor 4E family member 3 Neighboring gene uncharacterized LOC132343537 Neighboring gene microRNA mir-1284 Neighboring gene uncharacterized LOC104976682 Neighboring gene uncharacterized LOC132343466 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC139185

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription repressor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    forkhead box protein P1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001083689.1 → NP_001077158.1  forkhead box protein P1

      See identical proteins and their annotated locations for NP_001077158.1

      Status: PROVISIONAL

      Source sequence(s)
      BC134525
      UniProtKB/Swiss-Prot
      A4IFD2
      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Related
      ENSBTAP00070027307.1, ENSBTAT00070045465.1
      Conserved Domains (2) summary
      cd00059
      Location:462 → 534
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:300 → 367
      FOXP-CC; FOXP coiled-coil domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      30062278..30690217
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059879649.1 → XP_059735632.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    2. XM_059879647.1 → XP_059735630.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    3. XM_059879650.1 → XP_059735633.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    4. XM_059879651.1 → XP_059735634.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    5. XM_059879652.1 → XP_059735635.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    6. XM_059879648.1 → XP_059735631.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    7. XM_059879646.1 → XP_059735629.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    8. XM_024982681.2 → XP_024838449.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    9. XM_024982682.2 → XP_024838450.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    10. XM_059879653.1 → XP_059735636.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    11. XM_024982687.2 → XP_024838455.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    12. XM_024982689.2 → XP_024838457.1  forkhead box protein P1 isoform X3

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:490 → 562
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    13. XM_024982688.2 → XP_024838456.1  forkhead box protein P1 isoform X2

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:490 → 562
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:327 → 394
      FOXP-CC; FOXP coiled-coil domain

    14. XM_005222651.5 → XP_005222708.1  forkhead box protein P1 isoform X4

      See identical proteins and their annotated locations for XP_005222708.1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:463 → 535
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:300 → 367
      FOXP-CC; FOXP coiled-coil domain

    15. XM_005222658.5 → XP_005222715.1  forkhead box protein P1 isoform X6

      See identical proteins and their annotated locations for XP_005222715.1

      UniProtKB/Swiss-Prot
      A4IFD2
      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:462 → 534
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:300 → 367
      FOXP-CC; FOXP coiled-coil domain

    16. XM_015459516.3 → XP_015315002.1  forkhead box protein P1 isoform X5

      UniProtKB/TrEMBL
      A0AAF6Z2N7, A0AAF7A1V8
      Related
      ENSBTAP00070027317.1, ENSBTAT00070045494.1
      Conserved Domains (2) summary
      cd00059
      Location:462 → 534
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:299 → 366
      FOXP-CC; FOXP coiled-coil domain

    17. XM_024982692.2 → XP_024838460.1  forkhead box protein P1 isoform X7

      UniProtKB/TrEMBL
      A0AAF7ARI0
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    18. XM_059879645.1 → XP_059735628.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    19. XM_059879654.1 → XP_059735637.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    20. XM_059879655.1 → XP_059735638.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    21. XM_059879656.1 → XP_059735639.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    22. XM_024982686.2 → XP_024838454.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    23. XM_024982684.2 → XP_024838452.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:491 → 563
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:328 → 395
      FOXP-CC; FOXP coiled-coil domain

    24. XM_059879657.1 → XP_059735640.1  forkhead box protein P1 isoform X1

      UniProtKB/TrEMBL
      A0AAF6Z2N7

    25. XM_024982697.2 → XP_024838465.1  forkhead box protein P1 isoform X8

      UniProtKB/TrEMBL
      A0AAF7ARI0
      Conserved Domains (2) summary
      cd00059
      Location:364 → 436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201 → 268
      FOXP-CC; FOXP coiled-coil domain

    26. XM_024982695.2 → XP_024838463.1  forkhead box protein P1 isoform X10

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:363 → 435
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201 → 268
      FOXP-CC; FOXP coiled-coil domain

    27. XM_024982694.2 → XP_024838462.1  forkhead box protein P1 isoform X9

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:363 → 435
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:200 → 267
      FOXP-CC; FOXP coiled-coil domain

    28. XM_024982693.2 → XP_024838461.1  forkhead box protein P1 isoform X8

      UniProtKB/TrEMBL
      A0AAF7ARI0
      Conserved Domains (2) summary
      cd00059
      Location:364 → 436
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:201 → 268
      FOXP-CC; FOXP coiled-coil domain

    29. XM_024982696.2 → XP_024838464.1  forkhead box protein P1 isoform X9

      UniProtKB/TrEMBL
      A0AAF6Z2N7
      Conserved Domains (2) summary
      cd00059
      Location:363 → 435
      FH; Forkhead (FH), also known as a "winged helix". FH is named for the Drosophila fork head protein, a transcription factor which promotes terminal rather than segmental development. This family of transcription factor domains, which bind to B-DNA as ...
      pfam16159
      Location:200 → 267
      FOXP-CC; FOXP coiled-coil domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A4IFD2.1 GenPept UniProtKB/Swiss-Prot:A4IFD2

    Gene LinkOut

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