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    Gm16405 predicted gene 16405 [ Mus musculus (house mouse) ]

    Gene ID: 100040867, updated on 27-Nov-2024

    Summary

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    Official Symbol
    Gm16405provided by MGI
    Official Full Name
    predicted gene 16405provided by MGI
    Primary source
    MGI:MGI:3647662
    See related
    Ensembl:ENSMUSG00000096468 AllianceGenome:MGI:3647662
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG625802
    Expression
    Restricted expression toward testis adult (RPKM 11.4) See more
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    Genomic context

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    See Gm16405 in Genome Data Viewer
    Location:
    X A5; X 30.06 cM
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (53533133..53549983)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (54531166..54548016)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene 14596 Neighboring gene predicted gene 14594 Neighboring gene predicted gene 16430 Neighboring gene predicted gene 14595

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Bibliography

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    Related articles in PubMed

    1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein LOC100040867

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001166646.1 → NP_001160118.1  uncharacterized protein LOC100040867

      See identical proteins and their annotated locations for NP_001160118.1

      Status: VALIDATED

      Source sequence(s)
      CR954967
      Consensus CDS
      CCDS53072.1
      UniProtKB/TrEMBL
      A6X8J1
      Related
      ENSMUSP00000136138.2, ENSMUST00000180150.8
      Conserved Domains (1) summary
      pfam04803
      Location:100 → 155
      Cor1; Cor1/Xlr/Xmr conserved region

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      53533133..53549983
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017318332.1 → XP_017173821.1  uncharacterized protein LOC100040867 isoform X1

      UniProtKB/TrEMBL
      A6X8J1
      Conserved Domains (1) summary
      pfam04803
      Location:100 → 155
      Cor1; Cor1/Xlr/Xmr conserved region
    Nucleotide Protein
    Heading Accession and Version

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