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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001253885.2 → NP_001240814.1 amyloid beta precursor protein binding family B member 1 isoform 1
See identical proteins and their annotated locations for NP_001240814.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longest isoform (1).
- Source sequence(s)
-
AC125227
- Consensus CDS
-
CCDS80776.1
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C1
- Related
- ENSMUSP00000140116.2, ENSMUST00000191601.7
- Conserved Domains (3) summary
-
- cd01271
Location:535 → 660
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:368 → 507
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:255 → 283
- WW; WW domain
-
NM_001253886.2 → NP_001240815.1 amyloid beta precursor protein binding family B member 1 isoform 2
See identical proteins and their annotated locations for NP_001240815.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) lacks an in-frame exon in the coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1. Variants 2 and 4 encode the same isoform (2).
- Source sequence(s)
-
AC125227
- Consensus CDS
-
CCDS80775.1
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C6
- Related
- ENSMUSP00000140979.2, ENSMUST00000189378.7
- Conserved Domains (3) summary
-
- cd01271
Location:533 → 658
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:368 → 505
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:255 → 283
- WW; WW domain
-
NM_001253887.2 → NP_001240816.1 amyloid beta precursor protein binding family B member 1 isoform 3
See identical proteins and their annotated locations for NP_001240816.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and has multiple coding region differences compared to variant 1. These differences cause translation initiation at a downstream AUG and result in an isoform (3) with a shorter N-terminus compared to isoform 1.
- Source sequence(s)
-
AC125227
- Consensus CDS
-
CCDS80773.1
- UniProtKB/TrEMBL
- A0A087WR62, Q80Y77
- Related
- ENSMUSP00000140486.2, ENSMUST00000190369.7
- Conserved Domains (3) summary
-
- cd01271
Location:276 → 401
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 248
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain
-
NM_001310600.2 → NP_001297529.1 amyloid beta precursor protein binding family B member 1 isoform 4
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 1. It encodes isoform 4, which is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AC125227
- Consensus CDS
-
CCDS80774.1
- UniProtKB/TrEMBL
-
A0A087WPS7
- Related
- ENSMUSP00000139899.2, ENSMUST00000187057.7
- Conserved Domains (3) summary
-
- cd01271
Location:310 → 435
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:145 → 282
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:32 → 60
- WW; WW domain
-
NM_001411958.1 → NP_001398887.1 amyloid beta precursor protein binding family B member 1 isoform 2
Status: VALIDATED
- Source sequence(s)
-
AC125227
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C6
-
NM_001411959.1 → NP_001398888.1 amyloid beta precursor protein binding family B member 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC125227
- UniProtKB/TrEMBL
-
Q80Y77
-
NM_001411960.1 → NP_001398889.1 amyloid beta precursor protein binding family B member 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC125227
- UniProtKB/TrEMBL
-
Q80Y77
-
NM_001411961.1 → NP_001398890.1 amyloid beta precursor protein binding family B member 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC125227
- UniProtKB/TrEMBL
-
Q80Y77
-
NM_001411962.1 → NP_001398891.1 amyloid beta precursor protein binding family B member 1 isoform 5
Status: VALIDATED
- Source sequence(s)
-
AC125227
- UniProtKB/TrEMBL
-
Q80Y77
-
NM_001411964.1 → NP_001398893.1 amyloid beta precursor protein binding family B member 1 isoform 6
Status: VALIDATED
- Source sequence(s)
-
AC125227
-
NM_009685.4 → NP_033815.1 amyloid beta precursor protein binding family B member 1 isoform 2
See identical proteins and their annotated locations for NP_033815.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and lacks an in-frame exon in the coding region compared to variant 1. This results in a shorter protein (isoform 2) compared to isoform 1. Variants 2, 4, and 6 all encode the same isoform (2).
- Source sequence(s)
-
AC125227
- Consensus CDS
-
CCDS80775.1
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C6
- Related
- ENSMUSP00000140973.2, ENSMUST00000191011.7
- Conserved Domains (3) summary
-
- cd01271
Location:533 → 658
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:368 → 505
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:255 → 283
- WW; WW domain
RNA
-
NR_177986.1 RNA Sequence
Status: VALIDATED
- Source sequence(s)
-
AC125227
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000073.7 Reference GRCm39 C57BL/6J
- Range
-
105207691..105231151 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_006507230.3 → XP_006507293.1 amyloid beta precursor protein binding family B member 1 isoform X1
See identical proteins and their annotated locations for XP_006507293.1
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C1
- Conserved Domains (3) summary
-
- cd01271
Location:535 → 660
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:368 → 507
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:255 → 283
- WW; WW domain
-
XM_006507231.1 → XP_006507294.1 amyloid beta precursor protein binding family B member 1 isoform X1
See identical proteins and their annotated locations for XP_006507294.1
- UniProtKB/Swiss-Prot
- E9QNW5, O08642, Q3TPU0, Q8BNF4, Q8BSR9, Q9QXJ1
- UniProtKB/TrEMBL
-
A0A0R4J2C1
- Conserved Domains (3) summary
-
- cd01271
Location:535 → 660
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:368 → 507
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:255 → 283
- WW; WW domain
-
XM_006507236.4 → XP_006507299.1 amyloid beta precursor protein binding family B member 1 isoform X6
See identical proteins and their annotated locations for XP_006507299.1
- UniProtKB/TrEMBL
- A0A087WR62, Q80Y77
- Conserved Domains (3) summary
-
- cd01271
Location:276 → 401
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 248
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain
-
XM_006507235.4 → XP_006507298.1 amyloid beta precursor protein binding family B member 1 isoform X6
See identical proteins and their annotated locations for XP_006507298.1
- UniProtKB/TrEMBL
- A0A087WR62, Q80Y77
- Related
- ENSMUSP00000139575.2, ENSMUST00000189072.7
- Conserved Domains (3) summary
-
- cd01271
Location:276 → 401
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 248
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain
-
XM_036152596.1 → XP_036008489.1 amyloid beta precursor protein binding family B member 1 isoform X6
- UniProtKB/TrEMBL
- A0A087WR62, Q80Y77
- Conserved Domains (3) summary
-
- cd01271
Location:276 → 401
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 248
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain
-
XM_006507234.4 → XP_006507297.1 amyloid beta precursor protein binding family B member 1 isoform X6
See identical proteins and their annotated locations for XP_006507297.1
- UniProtKB/TrEMBL
- A0A087WR62, Q80Y77
- Conserved Domains (3) summary
-
- cd01271
Location:276 → 401
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 248
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain
-
XM_017321947.3 → XP_017177436.1 amyloid beta precursor protein binding family B member 1 isoform X5
- UniProtKB/TrEMBL
-
A0A087WPI2
- Related
- ENSMUSP00000139788.2, ENSMUST00000188368.7
- Conserved Domains (3) summary
-
- cd01271
Location:312 → 437
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:145 → 284
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:32 → 60
- WW; WW domain
-
XM_036152595.1 → XP_036008488.1 amyloid beta precursor protein binding family B member 1 isoform X4
- Conserved Domains (3) summary
-
- cd01271
Location:333 → 458
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:168 → 305
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:55 → 83
- WW; WW domain
-
XM_006507232.5 → XP_006507295.1 amyloid beta precursor protein binding family B member 1 isoform X3
- Conserved Domains (3) summary
-
- cd01271
Location:335 → 460
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:168 → 307
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:55 → 83
- WW; WW domain
-
XM_036152597.1 → XP_036008490.1 amyloid beta precursor protein binding family B member 1 isoform X7
- UniProtKB/TrEMBL
-
Q80Y77
- Conserved Domains (3) summary
-
- cd01271
Location:274 → 399
- PTB2_Fe65; Fe65 C-terminal Phosphotyrosine-binding (PTB) domain
- cd01272
Location:109 → 246
- PTB1_Fe65; Fe65 N-terminal Phosphotyrosine-binding (PTB) domain
- pfam00397
Location:5 → 24
- WW; WW domain