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    LOC1278919 ryanodine receptor [ Anopheles gambiae (African malaria mosquito) ]

    Gene ID: 1278919, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC1278919
    Gene description
    ryanodine receptor
    See related
    VectorBase:AGAMI1_012792
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Anopheles gambiae
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Anophelinae; Anopheles
    Also known as
    AGAP010750
    Orthologs
    fruit fly all
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    Genomic context

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    See LOC1278919 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    33
    Annotation release Status Assembly Chr Location
    RS_2023_12 current idAnoGambNW_F1_1 (GCF_943734735.2) 3 NC_064602.1 (67852483..67894676)

    Chromosome 3 - NC_064602.1Genomic Context describing neighboring genes Neighboring gene nephrin Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene zinc finger protein 37 Neighboring gene transmembrane protein 60 Neighboring gene membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_064602.1 Chromosome 3 Reference idAnoGambNW_F1_1 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ryanodine-sensitive calcium-release channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in intracellular calcium ion homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Z disc IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of calcium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcolemma IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in sarcoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in smooth endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ryanodine receptor
    Names
    AGAP010750-PA

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_943734735.2-RS_2023_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference idAnoGambNW_F1_1 Primary Assembly

    Genomic

    1. NC_064602.1 Reference idAnoGambNW_F1_1 Primary Assembly

      Range
      67852483..67894676
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_061659399.1 → XP_061515383.1  ryanodine receptor isoform X2

      UniProtKB/TrEMBL
      A0A903XMT2

    2. XM_061659398.1 → XP_061515382.1  ryanodine receptor isoform X1

      UniProtKB/TrEMBL
      A0A1S4H4U6

    3. XM_061659404.1 → XP_061515388.1  ryanodine receptor isoform X8

      UniProtKB/TrEMBL
      A0A1S4H4U6

    4. XM_061659405.1 → XP_061515389.1  ryanodine receptor isoform X9

      UniProtKB/TrEMBL
      A0A1S4H4U6

    5. XM_061659400.1 → XP_061515384.1  ryanodine receptor isoform X4

      UniProtKB/TrEMBL
      A0A1S4H4U6

    6. XM_061659403.1 → XP_061515387.1  ryanodine receptor isoform X7

      UniProtKB/TrEMBL
      A0A1S4H4U6

    7. XM_061659407.1 → XP_061515391.1  ryanodine receptor isoform X11

      UniProtKB/TrEMBL
      A0A903XMT2

    8. XM_061659409.1 → XP_061515393.1  ryanodine receptor isoform X13

      UniProtKB/TrEMBL
      A0A903XMT2

    9. XM_318561.4 → XP_318561.4  ryanodine receptor isoform X3

      UniProtKB/TrEMBL
      A0A1S4H4U6

    10. XM_061659401.1 → XP_061515385.1  ryanodine receptor isoform X5

      UniProtKB/TrEMBL
      A0A1S4H4U6

    11. XM_061659402.1 → XP_061515386.1  ryanodine receptor isoform X6

      UniProtKB/TrEMBL
      A0A1S4H4U6

    12. XM_061659406.1 → XP_061515390.1  ryanodine receptor isoform X10

      UniProtKB/TrEMBL
      A0A1S4H4U6

    13. XM_061659408.1 → XP_061515392.1  ryanodine receptor isoform X12

      UniProtKB/TrEMBL
      A0A1S4H4U6
    Nucleotide Protein Strain
    Heading Accession and Version

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