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The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCr8
Genomic
-
NC_086026.1 Reference GRCr8
- Range
-
68169711..68322158 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_039082421.2 → XP_038938349.1 neogenin isoform X13
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:645 → 724
- FN3; Fibronectin type 3 domain
- cd00063
Location:445 → 534
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1064 → 1367
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_063266212.1 → XP_063122282.1 neogenin isoform X7
- UniProtKB/Swiss-Prot
-
P97603
-
XM_063266211.1 → XP_063122281.1 neogenin isoform X6
- UniProtKB/Swiss-Prot
-
P97603
-
XM_039082417.2 → XP_038938345.1 neogenin isoform X5
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:750 → 829
- FN3; Fibronectin type 3 domain
- cd00063
Location:550 → 639
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1158 → 1461
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_039082419.2 → XP_038938347.1 neogenin isoform X11
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:750 → 829
- FN3; Fibronectin type 3 domain
- cd00063
Location:550 → 639
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1169 → 1419
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:268 → 272
- Ig; Ig strand A' [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:265 → 348
- Ig; Immunoglobulin domain
-
XM_039082415.2 → XP_038938343.1 neogenin isoform X3
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:750 → 829
- FN3; Fibronectin type 3 domain
- cd00063
Location:550 → 639
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1169 → 1472
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_063266216.1 → XP_063122286.1 neogenin isoform X12
- UniProtKB/Swiss-Prot
-
P97603
- UniProtKB/TrEMBL
-
A0A8I5ZQS8
-
XM_039082416.2 → XP_038938344.1 neogenin isoform X4
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:770 → 849
- FN3; Fibronectin type 3 domain
- cd00063
Location:570 → 659
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1162 → 1465
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_063266214.1 → XP_063122284.1 neogenin isoform X10
- UniProtKB/Swiss-Prot
-
P97603
-
XM_039082414.2 → XP_038938342.1 neogenin isoform X2
- UniProtKB/Swiss-Prot
-
P97603
- Conserved Domains (7) summary
-
- smart00060
Location:770 → 849
- FN3; Fibronectin type 3 domain
- cd00063
Location:570 → 659
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1173 → 1476
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_063266213.1 → XP_063122283.1 neogenin isoform X9
- UniProtKB/Swiss-Prot
-
P97603
-
XM_039082413.2 → XP_038938341.1 neogenin isoform X1
- UniProtKB/Swiss-Prot
-
P97603
- UniProtKB/TrEMBL
-
A0A8I5Y1H5
- Related
- ENSRNOP00000077374.1, ENSRNOT00000117001.2
- Conserved Domains (7) summary
-
- smart00060
Location:770 → 849
- FN3; Fibronectin type 3 domain
- cd00063
Location:570 → 659
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1178 → 1481
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:263 → 266
- Ig; Ig strand A [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:263 → 348
- Ig; Immunoglobulin domain
-
XM_039082418.2 → XP_038938346.1 neogenin isoform X8
- UniProtKB/Swiss-Prot
-
P97603
- Related
- ENSRNOP00000009496.8, ENSRNOT00000009496.9
- Conserved Domains (7) summary
-
- smart00060
Location:770 → 849
- FN3; Fibronectin type 3 domain
- cd00063
Location:570 → 659
- FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...
- pfam06583
Location:1189 → 1439
- Neogenin_C; Neogenin C-terminus
- cd00096
Location:268 → 272
- Ig; Ig strand A' [structural motif]
- cd05722
Location:63 → 159
- IgI_1_Neogenin_like; First immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cd05723
Location:355 → 438
- IgI_4_Neogenin_like; Fourth immunoglobulin (Ig)-like domain in neogenin, and similar domains; member of the I-set of Ig superfamily (IgSF) domains
- cl11960
Location:265 → 348
- Ig; Immunoglobulin domain
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_001191881.1: Suppressed sequence
- Description
- NM_001191881.1: This RefSeq was temporarily suppressed because currently there is not sufficient data to support this transcript.