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    LOC691414 hypothetical protein LOC691414 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 691414, updated on 3-Dec-2024

    Summary

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    Symbol
    LOC691414provided by RGD
    Full Name
    hypothetical protein LOC691414provided by RGD
    Primary source
    RGD:1583959
    See related
    AllianceGenome:RGD:1583959
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Expression
    Biased expression in Adrenal (RPKM 386.0), Testes (RPKM 326.1) and 1 other tissue See more
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    Genomic context

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    See LOC691414 in Genome Data Viewer
    Location:
    9q12
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 9 NC_086027.1 (17274997..17308446)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 9 NC_051344.1 (9954720..9964136, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 9 NC_005108.4 (8281747..8442062)

    Chromosome 9 - NC_086027.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480531 Neighboring gene uncharacterized LOC134480530 Neighboring gene reticulocalbin-1-like Neighboring gene uncharacterized LOC134480550

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    girdin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086027.1 Reference GRCr8

      Range
      17274997..17308446
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063268076.1 → XP_063124146.1  girdin-like isoform X2

      UniProtKB/TrEMBL
      A0A8I6AHR2

    2. XM_063268077.1 → XP_063124147.1  girdin-like isoform X2

      UniProtKB/TrEMBL
      A0A8I6AHR2

    3. XM_063268078.1 → XP_063124148.1  girdin-like isoform X3

      UniProtKB/TrEMBL
      A0A8I6AHA9

    4. XM_063268075.1 → XP_063124145.1  girdin-like isoform X1

      UniProtKB/TrEMBL
      A0A8I6AHA9
    Nucleotide Protein Strain
    Heading Accession and Version

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