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    RAG2 recombination activating 2 [ Neomonachus schauinslandi (Hawaiian monk seal) ]

    Gene ID: 110575731, updated on 15-Mar-2024

    Summary

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    Gene symbol
    RAG2
    Gene description
    recombination activating 2
    See related
    EnsemblRapid:ENSNSCG00000004914
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Neomonachus schauinslandi
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Phocidae; Neomonachus
    Orthologs
    human mouse all
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    Genomic context

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    See RAG2 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    101 current ASM220157v2 (GCF_002201575.2) 11 NC_058413.1 (23741608..23743191)
    100 previous assembly ASM220157v1 (GCF_002201575.1) Unplaced Scaffold NW_018734298.1 (27506306..27507889, complement)

    Chromosome 11 - NC_058413.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein S24-like Neighboring gene intraflagellar transport associated protein Neighboring gene recombination activating 1 Neighboring gene TNF receptor associated factor 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in V(D)J recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of DNA recombinase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    V(D)J recombination-activating protein 2
    Names
    recombinase activating protein 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Neomonachus schauinslandi Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ASM220157v2

    Genomic

    1. NC_058413.1 Reference ASM220157v2

      Range
      23741608..23743191
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021684749.1 → XP_021540424.1  V(D)J recombination-activating protein 2

      UniProtKB/TrEMBL
      A0A2Y9GT49
      Related
      ENSNSCP00000005900.1, ENSNSCT00000006681.1
      Conserved Domains (2) summary
      pfam03089
      Location:51 → 388
      RAG2; Recombination activating protein 2
      pfam13341
      Location:414 → 491
      RAG2_PHD; RAG2 PHD domain
    Nucleotide Protein
    Heading Accession and Version

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