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    LOC105094200 granzyme B [ Camelus dromedarius (Arabian camel) ]

    Gene ID: 105094200, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC105094200
    Gene description
    granzyme B
    Locus tag
    Cadr_000005822
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Camelus dromedarius
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Tylopoda; Camelidae; Camelus
    Also known as
    GZMB
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    Genomic context

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    See LOC105094200 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_04 current mCamDro1.pat (GCF_036321535.1) 5 NC_087440.1 (32505985..32513327, complement)
    101 previous assembly CamDro3 (GCF_000803125.2) 6 NC_044516.1 (34074069..34077387, complement)

    Chromosome 5 - NC_087440.1Genomic Context describing neighboring genes Neighboring gene cathepsin G Neighboring gene granzyme H Neighboring gene mast cell protease 1A Neighboring gene uncharacterized LOC116153493 Neighboring gene uncharacterized LOC135321300 Neighboring gene syntaxin binding protein 6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables serine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    granzyme B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_036321535.1-RS_2024_04

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCamDro1.pat

    Genomic

    1. NC_087440.1 Reference mCamDro1.pat

      Range
      32505985..32513327 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_064485867.1 → XP_064341937.1  granzyme B

      UniProtKB/TrEMBL
      A0A8B0SWD4, A0A8B0SYF4

    2. XM_010986180.3 → XP_010984482.3  granzyme B

      UniProtKB/TrEMBL
      A0A8B0SWD4, A0A8B0SYF4
    Nucleotide Protein
    Heading Accession and Version

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