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    LOC105332450 neuroglobin [ Magallana gigas (Pacific oyster) ]

    Gene ID: 105332450, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC105332450
    Gene description
    neuroglobin
    Locus tag
    CGI_10015261
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Magallana gigas
    Lineage
    Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Ostreida; Ostreoidea; Ostreidae; Magallana
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    Genomic context

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    See LOC105332450 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_06 current xbMagGiga1.1 (GCF_963853765.1) 6 NC_088858.1 (30702611..30722483, complement)
    102 previous assembly cgigas_uk_roslin_v1 (GCF_902806645.1) Linkage Group 3 NC_047561.1 (27474351..27478462)

    Chromosome 6 - NC_088858.1Genomic Context describing neighboring genes Neighboring gene centriole, cilia and spindle-associated protein Neighboring gene uncharacterized LOC117688911 Neighboring gene uncharacterized LOC105341275 Neighboring gene glutamate receptor ionotropic, kainate 3 Neighboring gene HHIP-like protein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxygen carrier activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in oxygen transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to hypoxia IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neuroglobin

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_963853765.1-RS_2024_06

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference xbMagGiga1.1

    Genomic

    1. NC_088858.1 Reference xbMagGiga1.1

      Range
      30702611..30722483 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_066088429.1 → XP_065944501.1  neuroglobin isoform X2

      UniProtKB/TrEMBL
      A0A8W8I012

    2. XM_034467853.2 → XP_034323744.2  neuroglobin isoform X1

      UniProtKB/TrEMBL
      A0A8W8I012
    Nucleotide Protein
    Heading Accession and Version

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