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    LOC100148510 uncharacterized LOC100148510 [ Danio rerio (zebrafish) ]

    Gene ID: 100148510, updated on 3-Dec-2024

    Summary

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    Gene symbol
    LOC100148510
    Gene description
    uncharacterized LOC100148510
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Orthologs
    all
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    Genomic context

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    See LOC100148510 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCz11 (GCF_000002035.6) 5 NC_007116.7 (22450036..22461391)
    105 previous assembly GRCz10 (GCF_000002035.5) 5 NC_007116.6 (21946075..21957084)

    Chromosome 5 - NC_007116.7Genomic Context describing neighboring genes Neighboring gene si:dkey-27p18.3 Neighboring gene si:dkey-27p18.6 Neighboring gene spectrin, beta, non-erythrocytic 4a Neighboring gene ribosomal protein L36A

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    uncharacterized protein LOC100148510

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007116.7 Reference GRCz11 Primary Assembly

      Range
      22450036..22461391
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021476448.2 → XP_021332123.1  uncharacterized protein LOC100148510 isoform X4

      UniProtKB/TrEMBL
      A0A8M1QLH8, A0A8M9Q9B6
      Conserved Domains (1) summary
      pfam00041
      Location:869 → 910
      fn3; Fibronectin type III domain

    2. XM_068221433.1 → XP_068077534.1  uncharacterized protein LOC100148510 isoform X2

      UniProtKB/TrEMBL
      A0A8M9Q9B6

    3. XM_068221432.1 → XP_068077533.1  uncharacterized protein LOC100148510 isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q9B6

    4. XM_068221434.1 → XP_068077535.1  uncharacterized protein LOC100148510 isoform X3

      UniProtKB/TrEMBL
      A0A8M9PKY1

    5. XM_021476449.2 → XP_021332124.1  uncharacterized protein LOC100148510 isoform X5

      UniProtKB/TrEMBL
      A0A8M9Q432, A0A8M9Q9B6
      Conserved Domains (1) summary
      pfam00041
      Location:866 → 907
      fn3; Fibronectin type III domain

    6. XM_068221435.1 → XP_068077536.1  uncharacterized protein LOC100148510 isoform X5

      UniProtKB/TrEMBL
      A0A8M9Q432, A0A8M9Q9B6

    Reference GRCz11 ALT_DRER_TU_1

    Genomic

    1. NW_018394572.1 Reference GRCz11 ALT_DRER_TU_1

      Range
      425791..437146
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001921861.8 → XP_001921896.3  uncharacterized protein LOC100148510 isoform X4

      UniProtKB/TrEMBL
      A0A8M1QLH8, A0A8M9Q9B6
      Conserved Domains (1) summary
      pfam00041
      Location:869 → 910
      fn3; Fibronectin type III domain

    2. XM_068218222.1 → XP_068074323.1  uncharacterized protein LOC100148510 isoform X2

      UniProtKB/TrEMBL
      A0A8M9Q9B6

    3. XM_068218221.1 → XP_068074322.1  uncharacterized protein LOC100148510 isoform X1

      UniProtKB/TrEMBL
      A0A8M9Q9B6

    4. XM_068218223.1 → XP_068074324.1  uncharacterized protein LOC100148510 isoform X3

      UniProtKB/TrEMBL
      A0A8M9PKY1

    5. XM_009301400.4 → XP_009299675.1  uncharacterized protein LOC100148510 isoform X5

      See identical proteins and their annotated locations for XP_009299675.1

      UniProtKB/TrEMBL
      A0A8M9Q432, A0A8M9Q9B6
      Conserved Domains (1) summary
      pfam00041
      Location:866 → 907
      fn3; Fibronectin type III domain

    6. XM_068218224.1 → XP_068074325.1  uncharacterized protein LOC100148510 isoform X5

      UniProtKB/TrEMBL
      A0A8M9Q432, A0A8M9Q9B6
    Nucleotide Protein Strain
    Heading Accession and Version

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